RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 GLMNQ92990 594 aa18.07■□□□□ 0.48
H3F3B-209ENST00000589949 COQ10AQ96MF6 247 aa18.07■□□□□ 0.48
H3F3B-209ENST00000589949 ZNF599Q96NL3 588 aa18.07■□□□□ 0.48
H3F3B-209ENST00000589949 TMEM168Q9H0V1 697 aa18.07■□□□□ 0.48
H3F3B-209ENST00000589949 NOD2Q9HC29 1040 aa18.07■□□□□ 0.48
H3F3B-209ENST00000589949 CBX8Q9HC52 389 aa18.07■□□□□ 0.48
H3F3B-209ENST00000589949 PCDH18Q9HCL0 1135 aa18.07■□□□□ 0.48
H3F3B-209ENST00000589949 MRPL47Q9HD33 250 aaKnown RBP18.07■□□□□ 0.48
H3F3B-209ENST00000589949 DOLKQ9UPQ8 538 aa18.07■□□□□ 0.48
H3F3B-209ENST00000589949 SSUH2Q9Y2M2 353 aa18.07■□□□□ 0.48
H3F3B-209ENST00000589949 GCN1Q92616 2671 aaKnown RBP18.06■□□□□ 0.48
H3F3B-209ENST00000589949 CDRT15L2A8MXV6 281 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 H3BRJ5 948 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 ATXN7O15265 892 aaPredicted RBP18.06■□□□□ 0.48
H3F3B-209ENST00000589949 SERPINC1P01008 464 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 ALPIP09923 528 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 ZNF135P52742 658 aaPredicted RBP18.06■□□□□ 0.48
H3F3B-209ENST00000589949 KIAA1024LP59773 190 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 MAXP61244 160 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 TRAF2Q12933 501 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 MMRN1Q13201 1228 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 IHHQ14623 411 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 NFKBIBQ15653 356 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 CNGA3Q16281 694 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 BOLA3Q53S33 107 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 PNCKQ6P2M8 343 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 FOXR1Q6PIV2 292 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 SDR16C5Q8N3Y7 309 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 LZTR1Q8N653 840 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 GPR156Q8NFN8 814 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 OR56A4Q8NGH8 313 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 SLC39A7Q92504 469 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 SMIM14Q96QK8 99 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.06■□□□□ 0.48
H3F3B-209ENST00000589949 SYNDIG1Q9H7V2 258 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 PCDHGA8Q9Y5G5 932 aa18.06■□□□□ 0.48
H3F3B-209ENST00000589949 CFAP46Q8IYW2 2715 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 A0A087X0T9 212 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 KLK10O43240 276 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 NOBOXO60393 691 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 TNFP01375 233 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 CD48P09326 243 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 FAM228BP0C875 321 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 LHCGRP22888 699 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 RENBPP51606 427 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 FANCCQ00597 558 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 SPIDRQ14159 915 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 ACOX1Q15067 660 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 OGFOD3Q6PK18 319 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 TMCO3Q6UWJ1 677 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 RFLNAQ6ZTI6 216 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 HSD11B1LQ7Z5J1 315 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 GKN2Q86XP6 184 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 KCNE4Q8WWG9 221 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 GRAMD1AQ96CP6 724 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 TRIM11Q96F44 468 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 NUDCD1Q96RS6 583 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 MGME1Q9BQP7 344 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 FOXP3Q9BZS1 431 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 THSD1Q9NS62 852 aa18.05■□□□□ 0.48
H3F3B-209ENST00000589949 NPIPB15A6NHN6 443 aaPredicted RBP18.04■□□□□ 0.48
H3F3B-209ENST00000589949 HEXIM1O94992 359 aaKnown RBP18.04■□□□□ 0.48
H3F3B-209ENST00000589949 CYP1A2P05177 515 aa18.04■□□□□ 0.48
H3F3B-209ENST00000589949 HOXC4P09017 264 aaPredicted RBP18.04■□□□□ 0.48
H3F3B-209ENST00000589949 ARL4AP40617 200 aa18.04■□□□□ 0.48
H3F3B-209ENST00000589949 ARSEP51690 589 aa18.04■□□□□ 0.48
H3F3B-209ENST00000589949 POLR2LP62875 67 aaKnown RBP18.04■□□□□ 0.48
H3F3B-209ENST00000589949 ZNF235Q14590 738 aa18.04■□□□□ 0.48
H3F3B-209ENST00000589949 TDRD12Q587J7 1177 aaKnown RBP18.04■□□□□ 0.48
H3F3B-209ENST00000589949 TSPAN33Q86UF1 283 aa18.04■□□□□ 0.48
H3F3B-209ENST00000589949 NIPA2Q8N8Q9 360 aa18.04■□□□□ 0.48
H3F3B-209ENST00000589949 FAM46DQ8NEK8 389 aa18.04■□□□□ 0.48
H3F3B-209ENST00000589949 PDCD6IPQ8WUM4 868 aaKnown RBP18.04■□□□□ 0.48
H3F3B-209ENST00000589949 CPLX3Q8WVH0 158 aa18.04■□□□□ 0.48
H3F3B-209ENST00000589949 TEKT4Q8WW24 435 aa18.04■□□□□ 0.48
H3F3B-209ENST00000589949 SCG3Q8WXD2 468 aaKnown RBP18.04■□□□□ 0.48
H3F3B-209ENST00000589949 NUP85Q9BW27 656 aa18.04■□□□□ 0.48
H3F3B-209ENST00000589949 CYP4F12Q9HCS2 524 aa18.04■□□□□ 0.48
H3F3B-209ENST00000589949 ST14Q9Y5Y6 855 aa18.04■□□□□ 0.48
H3F3B-209ENST00000589949 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.03■□□□□ 0.48
H3F3B-209ENST00000589949 A0A1W2PQJ5 194 aa18.03■□□□□ 0.48
H3F3B-209ENST00000589949 SYCE3A1L190 88 aa18.03■□□□□ 0.48
H3F3B-209ENST00000589949 D6RAR5 112 aa18.03■□□□□ 0.48
H3F3B-209ENST00000589949 CACNB4O00305 520 aaPredicted RBP18.03■□□□□ 0.48
H3F3B-209ENST00000589949 TNFSF15O95150 251 aa18.03■□□□□ 0.48
H3F3B-209ENST00000589949 CPP00450 1065 aa18.03■□□□□ 0.48
H3F3B-209ENST00000589949 RPLP0P05388 317 aaKnown RBP18.03■□□□□ 0.48
H3F3B-209ENST00000589949 RBMS1P29558 406 aaKnown RBP18.03■□□□□ 0.48
H3F3B-209ENST00000589949 ETV3P41162 512 aa18.03■□□□□ 0.48
H3F3B-209ENST00000589949 PIGHQ14442 188 aaPredicted RBP18.03■□□□□ 0.48
H3F3B-209ENST00000589949 ATP13A4Q4VNC1 1196 aa18.03■□□□□ 0.48
H3F3B-209ENST00000589949 ARHGAP40Q5TG30 622 aa18.03■□□□□ 0.48
H3F3B-209ENST00000589949 DENND2CQ68D51 928 aa18.03■□□□□ 0.48
H3F3B-209ENST00000589949 TMPRSS9Q7Z410 1059 aa18.03■□□□□ 0.48
H3F3B-209ENST00000589949 TAF8Q7Z7C8 310 aa18.03■□□□□ 0.48
H3F3B-209ENST00000589949 CLEC14AQ86T13 490 aa18.03■□□□□ 0.48
H3F3B-209ENST00000589949 NRROSQ86YC3 692 aa18.03■□□□□ 0.48
H3F3B-209ENST00000589949 PAF1Q8N7H5 531 aa18.03■□□□□ 0.48
H3F3B-209ENST00000589949 Q8N9G6 341 aaPredicted RBP18.03■□□□□ 0.48
H3F3B-209ENST00000589949 WDR36Q8NI36 951 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms