RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 PRR11Q96HE9 360 aaPredicted RBP12.26□□□□□ -0.45
VAT1-206ENST00000589709 COQ10AQ96MF6 247 aa12.26□□□□□ -0.45
VAT1-206ENST00000589709 FCRL3Q96P31 734 aaPredicted RBP12.26□□□□□ -0.45
VAT1-206ENST00000589709 NUDCD1Q96RS6 583 aa12.26□□□□□ -0.45
VAT1-206ENST00000589709 DPH1Q9BZG8 443 aa12.26□□□□□ -0.45
VAT1-206ENST00000589709 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.26□□□□□ -0.45
VAT1-206ENST00000589709 ETNK2Q9NVF9 386 aa12.26□□□□□ -0.45
VAT1-206ENST00000589709 RCOR3Q9P2K3 495 aaPredicted RBP12.26□□□□□ -0.45
VAT1-206ENST00000589709 IP6K2Q9UHH9 426 aa12.26□□□□□ -0.45
VAT1-206ENST00000589709 GPR34Q9UPC5 381 aa12.26□□□□□ -0.45
VAT1-206ENST00000589709 SATB2Q9UPW6 733 aa12.26□□□□□ -0.45
VAT1-206ENST00000589709 SSUH2Q9Y2M2 353 aa12.26□□□□□ -0.45
VAT1-206ENST00000589709 LOC400499M0QZD8 3231 aa12.26□□□□□ -0.45
VAT1-206ENST00000589709 LRRK1Q38SD2 2015 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 CCDC187A0A096LP49 1063 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 TMEM202A6NGA9 273 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 EIF4E1BA6NMX2 242 aaKnown RBP12.25□□□□□ -0.45
VAT1-206ENST00000589709 ATXN7O15265 892 aaPredicted RBP12.25□□□□□ -0.45
VAT1-206ENST00000589709 SERPING1P05155 500 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 CYP1A2P05177 515 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 IL4RP24394 825 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 SERPINB6P35237 376 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 CDH6P55285 790 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 TPM4P67936 248 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 SKOR1P84550 965 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 SPIDRQ14159 915 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 SMTNL2Q2TAL5 461 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 TDRD12Q587J7 1177 aaKnown RBP12.25□□□□□ -0.45
VAT1-206ENST00000589709 C3orf38Q5JPI3 329 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 BROXQ5VW32 411 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 PNCKQ6P2M8 343 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 PGBD5Q8N414 524 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 KYQ8NBH2 561 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 GPR156Q8NFN8 814 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 FAM71BQ8TC56 605 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 NSMCE1Q8WV22 266 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 OR1E3Q8WZA6 343 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 HSPH1Q92598 858 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 PDXPQ96GD0 296 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 MGME1Q9BQP7 344 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.25□□□□□ -0.45
VAT1-206ENST00000589709 THAP2Q9H0W7 228 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 NOD2Q9HC29 1040 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 CBX8Q9HC52 389 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 PCDH18Q9HCL0 1135 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 FGF22Q9HCT0 170 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 B4GALT6Q9UBX8 382 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 CAPN11Q9UMQ6 739 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 PHTF1Q9UMS5 762 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 PCDHGC4Q9Y5F7 938 aa12.25□□□□□ -0.45
VAT1-206ENST00000589709 COL27A1Q8IZC6 1860 aaPredicted RBP12.25□□□□□ -0.45
VAT1-206ENST00000589709 A0A087X0T9 212 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 CDRT15L2A8MXV6 281 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 MYO1FO00160 1098 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 PSMD11O00231 422 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 HEXIM1O94992 359 aaKnown RBP12.24□□□□□ -0.45
VAT1-206ENST00000589709 FAM228BP0C875 321 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 PNLIPP16233 465 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 TEAD1P28347 426 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 VIPR1P32241 457 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 PDX1P52945 283 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 UBASH3AP57075 661 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 SLC25A11Q02978 314 aaKnown RBP12.24□□□□□ -0.45
VAT1-206ENST00000589709 EIF3IQ13347 325 aaKnown RBP12.24□□□□□ -0.45
VAT1-206ENST00000589709 ACOX1Q15067 660 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 TSR1Q2NL82 804 aaKnown RBP12.24□□□□□ -0.45
VAT1-206ENST00000589709 MARC1Q5VT66 337 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 KCTD16Q68DU8 428 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 TXNRD3NBQ6F5E7 133 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 NYAP1Q6ZVC0 841 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 CLEC14AQ86T13 490 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 ARL14Q8N4G2 192 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 ATPAF2Q8N5M1 289 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 TEX26Q8N6G2 289 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 SNRNP27Q8WVK2 155 aaKnown RBP12.24□□□□□ -0.45
VAT1-206ENST00000589709 KCNE4Q8WWG9 221 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 CCDC74AQ96AQ1 378 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 CCDC97Q96F63 343 aaPredicted RBP12.24□□□□□ -0.45
VAT1-206ENST00000589709 SCRN2Q96FV2 425 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 LIN37Q96GY3 246 aaPredicted RBP12.24□□□□□ -0.45
VAT1-206ENST00000589709 GFM1Q96RP9 751 aaKnown RBP12.24□□□□□ -0.45
VAT1-206ENST00000589709 NUP85Q9BW27 656 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 TEX101Q9BY14 249 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 WDR26Q9H7D7 661 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 SIRPGQ9P1W8 387 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 RABGEF1Q9UJ41 708 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 ANAPC7Q9UJX3 599 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 APPL1Q9UKG1 709 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 PPIL1Q9Y3C6 166 aa12.24□□□□□ -0.45
VAT1-206ENST00000589709 A0A1W2PQM1 296 aa12.23□□□□□ -0.45
VAT1-206ENST00000589709 TTC24A2A3L6 582 aaPredicted RBP12.23□□□□□ -0.45
VAT1-206ENST00000589709 A8MX80 341 aa12.23□□□□□ -0.45
VAT1-206ENST00000589709 CASC3O15234 703 aaKnown RBP12.23□□□□□ -0.45
VAT1-206ENST00000589709 PGLSO95336 258 aa12.23□□□□□ -0.45
VAT1-206ENST00000589709 CPP00450 1065 aa12.23□□□□□ -0.45
VAT1-206ENST00000589709 CYP2A6P11509 494 aaPredicted RBP12.23□□□□□ -0.45
VAT1-206ENST00000589709 MYCLP1P12525 358 aaPredicted RBP12.23□□□□□ -0.45
VAT1-206ENST00000589709 GLB1P16278 677 aa12.23□□□□□ -0.45
VAT1-206ENST00000589709 CCKBRP32239 447 aa12.23□□□□□ -0.45
VAT1-206ENST00000589709 MMP13P45452 471 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms