RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 TLR8Q9NR97 1041 aaKnown RBP7.44□□□□□ -1.22
ZNF540-206ENST00000589117 RGS18Q9NS28 235 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 TMEM248Q9NWD8 314 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 MPP6Q9NZW5 540 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 C6orf203Q9P0P8 240 aaPredicted RBP7.44□□□□□ -1.22
ZNF540-206ENST00000589117 DLGAP2Q9P1A6 1054 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 NEU3Q9UQ49 428 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 WASF2Q9Y6W5 498 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 OR6C75A6NL08 312 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 TARM1B6A8C7 271 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 GIPC1O14908 333 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 CA12O43570 354 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 ZBTB14O43829 449 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 RAMP2O60895 175 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 GPC4O75487 556 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 IPO13O94829 963 aaKnown RBP7.44□□□□□ -1.22
ZNF540-206ENST00000589117 CHRNGP07510 517 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 COL6A1P12109 1028 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 YWHAQP27348 245 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 CST5P28325 142 aaPredicted RBP7.44□□□□□ -1.22
ZNF540-206ENST00000589117 GABRB3P28472 473 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 PBX3P40426 434 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 OR1G1P47890 313 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 ARSDP51689 593 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 TAS2R39P59534 338 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 RPL26P61254 145 aaKnown RBP7.44□□□□□ -1.22
ZNF540-206ENST00000589117 MPP1Q00013 466 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 GALNT1Q10472 559 aaPredicted RBP7.44□□□□□ -1.22
ZNF540-206ENST00000589117 MED21Q13503 144 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 ITGA7Q13683 1181 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 POLD3Q15054 466 aaPredicted RBP7.44□□□□□ -1.22
ZNF540-206ENST00000589117 PSMD5Q16401 504 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 MRNIPQ6NTE8 343 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 BNC2Q6ZN30 1099 aaPredicted RBP7.44□□□□□ -1.22
ZNF540-206ENST00000589117 FAM43BQ6ZT52 329 aaPredicted RBP7.44□□□□□ -1.22
ZNF540-206ENST00000589117 TRIM67Q6ZTA4 783 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 ZNF598Q86UK7 904 aaKnown RBP7.44□□□□□ -1.22
ZNF540-206ENST00000589117 TMEM126BQ8IUX1 230 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 ABI1Q8IZP0 508 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 TMEM151AQ8N4L1 468 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 SLC25A41Q8N5S1 370 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 CELF2-AS1Q8N7Q2 184 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 ICA1LQ8NDH6 482 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 ANAPC16Q96DE5 110 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 PABPC5Q96DU9 382 aaKnown RBP7.44□□□□□ -1.22
ZNF540-206ENST00000589117 PGLYRP2Q96PD5 576 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 ASB2Q96Q27 587 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 OR52B2Q96RD2 323 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 CDK5RAP1Q96SZ6 601 aaKnown RBP7.44□□□□□ -1.22
ZNF540-206ENST00000589117 FTHL17Q9BXU8 183 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 SHCBP1LQ9BZQ2 653 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 WDR55Q9H6Y2 383 aaPredicted RBP7.44□□□□□ -1.22
ZNF540-206ENST00000589117 COMMD8Q9NX08 183 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 ZDHHC2Q9UIJ5 367 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 VWA7Q9Y334 891 aa7.44□□□□□ -1.22
ZNF540-206ENST00000589117 PEX1O43933 1283 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 ADAMTS4O75173 837 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 PDE5AO76074 875 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 STAMBPO95630 424 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 EPOP01588 193 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 CCDC166P0CW27 439 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 CD86P42081 329 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 FLT3LGP49771 235 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 IL10RBQ08334 325 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 CSHL1Q14406 222 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 CD300LGQ6UXG3 332 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 RAB44Q7Z6P3 723 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-206ENST00000589117 SNX32Q86XE0 403 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 HPS6Q86YV9 775 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 CEP97Q8IW35 865 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 DSELQ8IZU8 1212 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 PGAM4Q8N0Y7 254 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 FAM169BQ8N8A8 192 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 ACVR1CQ8NER5 493 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 MAPK15Q8TD08 544 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 HEXDCQ8WVB3 486 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 PYDC1Q8WXC3 89 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 TRIB2Q92519 343 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 DLG3Q92796 817 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 FBXO32Q969P5 355 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 SLC39A13Q96H72 371 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 OMDQ99983 421 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 LBHD1Q9BQE6 289 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-206ENST00000589117 OXCT2Q9BYC2 517 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-206ENST00000589117 POLR1EQ9GZS1 481 aaKnown RBP7.43□□□□□ -1.22
ZNF540-206ENST00000589117 FAM192AQ9GZU8 254 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 ATXN3LQ9H3M9 355 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 POMKQ9H5K3 350 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 ZBTB26Q9HCK0 441 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 OSER1Q9NX31 292 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 GTSE1Q9NYZ3 720 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 PPM1HQ9ULR3 514 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 DPPA5A6NC42 116 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 J3QL48 77 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 PFDN6O15212 129 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 GRID2O43424 1007 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 SMIM24O75264 130 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 GLP2RO95838 553 aa7.43□□□□□ -1.22
ZNF540-206ENST00000589117 RPLP1P05386 114 aaKnown RBP7.43□□□□□ -1.22
ZNF540-206ENST00000589117 ACPPP15309 386 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms