RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.38□□□□□ -0.11
VMP1-206ENST00000587945 NTN3O00634 580 aaPredicted RBP14.38□□□□□ -0.11
VMP1-206ENST00000587945 HTRA2O43464 458 aaPredicted RBP14.38□□□□□ -0.11
VMP1-206ENST00000587945 TCEA3O75764 348 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 FAM228BP0C875 321 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 CR2P20023 1033 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 RBMS1P29558 406 aaKnown RBP14.38□□□□□ -0.11
VMP1-206ENST00000587945 UBASH3AP57075 661 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 KIAA1024LP59773 190 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 CCL7P80098 99 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 SLC25A11Q02978 314 aaKnown RBP14.38□□□□□ -0.11
VMP1-206ENST00000587945 TRAF2Q12933 501 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 MMRN1Q13201 1228 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 SPIDRQ14159 915 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 PIGHQ14442 188 aaPredicted RBP14.38□□□□□ -0.11
VMP1-206ENST00000587945 NFKBIBQ15653 356 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 CNGA3Q16281 694 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 DENND2CQ68D51 928 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 PNCKQ6P2M8 343 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 TAF8Q7Z7C8 310 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 B3GNT8Q7Z7M8 397 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 CPNE8Q86YQ8 564 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 SDR16C5Q8N3Y7 309 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 ATPAF2Q8N5M1 289 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 ATL2Q8NHH9 583 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 CCL4L1Q8NHW4 92 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 KCNE4Q8WWG9 221 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 SLC46A1Q96NT5 459 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 NUDCD1Q96RS6 583 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 NUP85Q9BW27 656 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 TMEM168Q9H0V1 697 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 SUDS3Q9H7L9 328 aaPredicted RBP14.38□□□□□ -0.11
VMP1-206ENST00000587945 CYP4F12Q9HCS2 524 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 THSD1Q9NS62 852 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 MOSPD1Q9UJG1 213 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 DGKBQ9Y6T7 804 aa14.38□□□□□ -0.11
VMP1-206ENST00000587945 A0A0U1RQS6 177 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 A0A1W2PQJ5 194 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 KLK10O43240 276 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 CPP00450 1065 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 SERPING1P05155 500 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 CYP1A2P05177 515 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 RPLP0P05388 317 aaKnown RBP14.37□□□□□ -0.11
VMP1-206ENST00000587945 CD48P09326 243 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 IL4RP24394 825 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 TRIM23P36406 574 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 SSR1P43307 286 aaKnown RBP14.37□□□□□ -0.11
VMP1-206ENST00000587945 CDH6P55285 790 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 KRT81Q14533 505 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 GPR155Q7Z3F1 870 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 NIPA2Q8N8Q9 360 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 Q8N9G6 341 aaPredicted RBP14.37□□□□□ -0.11
VMP1-206ENST00000587945 FAM46DQ8NEK8 389 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 GPR156Q8NFN8 814 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 TEKT4Q8WW24 435 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 SYN2Q92777 582 aaPredicted RBP14.37□□□□□ -0.11
VMP1-206ENST00000587945 GRAMD1AQ96CP6 724 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 COQ10AQ96MF6 247 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 MGME1Q9BQP7 344 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 FOXP3Q9BZS1 431 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 WDR26Q9H7D7 661 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 CPNE5Q9HCH3 593 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 IP6K2Q9UHH9 426 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 PCDHGA8Q9Y5G5 932 aa14.37□□□□□ -0.11
VMP1-206ENST00000587945 BZW2Q9Y6E2 419 aaKnown RBP14.37□□□□□ -0.11
VMP1-206ENST00000587945 BAHCC1Q9P281 2608 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 A0A1W2PQM1 296 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 AGRPO00253 132 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 SOCS5O75159 536 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 HEXIM1O94992 359 aaKnown RBP14.36□□□□□ -0.11
VMP1-206ENST00000587945 TNFSF15O95150 251 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 HOXC4P09017 264 aaPredicted RBP14.36□□□□□ -0.11
VMP1-206ENST00000587945 CTPS1P17812 591 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 LHCGRP22888 699 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 VIPR1P32241 457 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 GJC1P36383 396 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 HSPA9P38646 679 aaKnown RBP14.36□□□□□ -0.11
VMP1-206ENST00000587945 ETV3P41162 512 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 MMP13P45452 471 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 TPM4P67936 248 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 ZBED6P86452 979 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 ATP13A4Q4VNC1 1196 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 CCDC122Q5T0U0 273 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 MARC1Q5VT66 337 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 ALKBH5Q6P6C2 394 aaKnown RBP14.36□□□□□ -0.11
VMP1-206ENST00000587945 IGF2-ASQ6U949 168 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 HSD11B1LQ7Z5J1 315 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 TSPAN33Q86UF1 283 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 WDR36Q8NI36 951 aaKnown RBP14.36□□□□□ -0.11
VMP1-206ENST00000587945 WDR48Q8TAF3 677 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 NSMCE1Q8WV22 266 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 SLC39A7Q92504 469 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 NUS1Q96E22 293 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 SMIM14Q96QK8 99 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 GFM1Q96RP9 751 aaKnown RBP14.36□□□□□ -0.11
VMP1-206ENST00000587945 NT5MQ9NPB1 228 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 CAPN11Q9UMQ6 739 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 PTPRQQ9UMZ3 2332 aa14.36□□□□□ -0.11
VMP1-206ENST00000587945 CCDC187A0A096LP49 1063 aa14.35□□□□□ -0.11
VMP1-206ENST00000587945 NPIPB15A6NHN6 443 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms