RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 PHTF1Q9UMS5 762 aa19.9■□□□□ 0.78
TRIM47-204ENST00000587339 RPL26L1Q9UNX3 145 aaKnown RBP19.9■□□□□ 0.78
TRIM47-204ENST00000587339 SNX3O60493 162 aa19.89■□□□□ 0.77
TRIM47-204ENST00000587339 STMN1P16949 149 aa19.89■□□□□ 0.77
TRIM47-204ENST00000587339 CSRP3P50461 194 aa19.89■□□□□ 0.77
TRIM47-204ENST00000587339 IRX4P78413 519 aa19.89■□□□□ 0.77
TRIM47-204ENST00000587339 SF3A3Q12874 501 aaKnown RBP eCLIP19.89■□□□□ 0.771e-6■■■■□ 19.4
TRIM47-204ENST00000587339 PTPRRQ15256 657 aa19.89■□□□□ 0.77
TRIM47-204ENST00000587339 TAF1BQ53T94 588 aaPredicted RBP19.89■□□□□ 0.77
TRIM47-204ENST00000587339 TCEAL5Q5H9L2 206 aa19.89■□□□□ 0.77
TRIM47-204ENST00000587339 TMEM215Q68D42 235 aa19.89■□□□□ 0.77
TRIM47-204ENST00000587339 LDB1Q86U70 411 aaPredicted RBP19.89■□□□□ 0.77
TRIM47-204ENST00000587339 MFSD6LQ8IWD5 586 aa19.89■□□□□ 0.77
TRIM47-204ENST00000587339 TDHQ8IZJ6 230 aa19.89■□□□□ 0.77
TRIM47-204ENST00000587339 GPR150Q8NGU9 434 aa19.89■□□□□ 0.77
TRIM47-204ENST00000587339 ASIC4Q96FT7 647 aa19.89■□□□□ 0.77
TRIM47-204ENST00000587339 MECRQ9BV79 373 aa19.89■□□□□ 0.77
TRIM47-204ENST00000587339 MAGEE1Q9HCI5 957 aa19.89■□□□□ 0.77
TRIM47-204ENST00000587339 CATSPERZQ9NTU4 200 aa19.89■□□□□ 0.77
TRIM47-204ENST00000587339 TMEM216Q9P0N5 145 aa19.89■□□□□ 0.77
TRIM47-204ENST00000587339 FBXO10Q9UK96 956 aa19.89■□□□□ 0.77
TRIM47-204ENST00000587339 EMCNQ9ULC0 261 aa19.89■□□□□ 0.77
TRIM47-204ENST00000587339 PHGDHO43175 533 aaKnown RBP19.88■□□□□ 0.77
TRIM47-204ENST00000587339 HOXC11O43248 304 aaPredicted RBP19.88■□□□□ 0.77
TRIM47-204ENST00000587339 PLIN3O60664 434 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 S1PR4O95977 384 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 GSRP00390 522 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 GMPRP36959 345 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 DGKGP49619 791 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 SLC12A2P55011 1212 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 RAB10P61026 200 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 IRF9Q00978 393 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 POU4F1Q01851 419 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 GEN1Q17RS7 908 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 MYLK3Q32MK0 819 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 ANKRD54Q6NXT1 300 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 SYCE2Q6PIF2 218 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 SDCCAG8Q86SQ7 713 aaPredicted RBP19.88■□□□□ 0.77
TRIM47-204ENST00000587339 PLD6Q8N2A8 252 aaKnown RBP19.88■□□□□ 0.77
TRIM47-204ENST00000587339 PNPLA1Q8N8W4 532 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 GRAMD1AQ96CP6 724 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 HEPACAM2A8MVW5 462 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 BIRC5O15392 142 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 STX7O15400 261 aaKnown RBP19.88■□□□□ 0.77
TRIM47-204ENST00000587339 EDF1O60869 148 aaKnown RBP19.88■□□□□ 0.77
TRIM47-204ENST00000587339 NFATC1O95644 943 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 ALPIP09923 528 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 CTPS1P17812 591 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 BGNP21810 368 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 PSMA3P25788 255 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 CLCN5P51795 746 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 HNRNPH2P55795 449 aaKnown RBP19.88■□□□□ 0.77
TRIM47-204ENST00000587339 CCDC153Q494R4 210 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 CARD16Q5EG05 197 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 AFTPHQ6ULP2 937 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 CLEC14AQ86T13 490 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 NUDCD3Q8IVD9 361 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 TRIM42Q8IWZ5 723 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 ANKS4BQ8N8V4 417 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 CCDC197Q8NCU1 140 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 ZFYVE19Q96K21 471 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 TUBGCP5Q96RT8 1024 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 OMDQ99983 421 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 GPR63Q9BZJ6 419 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 EBF3Q9H4W6 596 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 ZNF358Q9NW07 568 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 POLR3BQ9NW08 1133 aaPredicted RBP19.88■□□□□ 0.77
TRIM47-204ENST00000587339 ERVW-1Q9UQF0 538 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 ANKRD6Q9Y2G4 727 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 ZNF711Q9Y462 761 aa19.88■□□□□ 0.77
TRIM47-204ENST00000587339 BPGMP07738 259 aa19.87■□□□□ 0.77
TRIM47-204ENST00000587339 SLC35E2BP0CK96 405 aa19.87■□□□□ 0.77
TRIM47-204ENST00000587339 CRABP2P29373 138 aa19.87■□□□□ 0.77
TRIM47-204ENST00000587339 NNMTP40261 264 aa19.87■□□□□ 0.77
TRIM47-204ENST00000587339 CCNHP51946 323 aaPredicted RBP19.87■□□□□ 0.77
TRIM47-204ENST00000587339 RAD51Q06609 339 aa19.87■□□□□ 0.77
TRIM47-204ENST00000587339 FASTKD1Q53R41 847 aaKnown RBP19.87■□□□□ 0.77
TRIM47-204ENST00000587339 SPATS2Q86XZ4 545 aaKnown RBP19.87■□□□□ 0.77
TRIM47-204ENST00000587339 CEP97Q8IW35 865 aa19.87■□□□□ 0.77
TRIM47-204ENST00000587339 TTC30BQ8N4P2 665 aa19.87■□□□□ 0.77
TRIM47-204ENST00000587339 ST13P5Q8NFI4 369 aaPredicted RBP19.87■□□□□ 0.77
TRIM47-204ENST00000587339 TSNARE1Q96NA8 513 aa19.87■□□□□ 0.77
TRIM47-204ENST00000587339 NDNQ99608 321 aa19.87■□□□□ 0.77
TRIM47-204ENST00000587339 CIPCQ9C0C6 399 aa19.87■□□□□ 0.77
TRIM47-204ENST00000587339 TRPV4Q9HBA0 871 aa19.87■□□□□ 0.77
TRIM47-204ENST00000587339 OBP2AQ9NY56 170 aa19.87■□□□□ 0.77
TRIM47-204ENST00000587339 SIRPGQ9P1W8 387 aa19.87■□□□□ 0.77
TRIM47-204ENST00000587339 ACOT9Q9Y305 439 aa19.87■□□□□ 0.77
TRIM47-204ENST00000587339 STARD13Q9Y3M8 1113 aa19.87■□□□□ 0.77
TRIM47-204ENST00000587339 PKP3Q9Y446 797 aa19.87■□□□□ 0.77
TRIM47-204ENST00000587339 A0A0J9YYE9 177 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 POP4O95707 220 aaKnown RBP19.86■□□□□ 0.77
TRIM47-204ENST00000587339 TRBC1P01850 177 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 PROCP04070 461 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 ARSAP15289 507 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 OGNP20774 298 aaKnown RBP19.86■□□□□ 0.77
TRIM47-204ENST00000587339 PMLP29590 882 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 HMGCLP35914 325 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 PGGT1BP53609 377 aa19.86■□□□□ 0.77
TRIM47-204ENST00000587339 TAS2R39P59534 338 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms