RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 OR52K2Q8NGK3 314 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 OR2T34Q8NGX1 318 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 FIBINQ8TAL6 211 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 DQX1Q8TE96 717 aaKnown RBP7.93□□□□□ -1.14
VMP1-204ENST00000587259 PTPRN2Q92932 1015 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 SERPINB11Q96P15 392 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 PEBP4Q96S96 227 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 SH3GL2Q99962 352 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 BRD8Q9H0E9 1235 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 DHX35Q9H5Z1 703 aaKnown RBP7.93□□□□□ -1.14
VMP1-204ENST00000587259 FZD3Q9NPG1 666 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 GRHL1Q9NZI5 618 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 PAK5Q9P286 719 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 TPX2Q9ULW0 747 aaKnown RBP7.93□□□□□ -1.14
VMP1-204ENST00000587259 FZD10Q9ULW2 581 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 R3HDM2Q9Y2K5 976 aaKnown RBP7.93□□□□□ -1.14
VMP1-204ENST00000587259 NEU2Q9Y3R4 380 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 PCDHB3Q9Y5E6 796 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 ATMQ13315 3056 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 CHD5Q8TDI0 1954 aa7.93□□□□□ -1.14
VMP1-204ENST00000587259 ARID1BQ8NFD5 2236 aaPredicted RBP7.93□□□□□ -1.14
VMP1-204ENST00000587259 COL5A1P20908 1838 aaPredicted RBP7.92□□□□□ -1.14
VMP1-204ENST00000587259 SYNJ2BP-COX16A0A087WUM0 186 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 PMS2P1A4D2B8 440 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 GOLGA6CA6NDK9 693 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 C10orf142B7Z368 130 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 H7C0C1 242 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 MTSS1O43312 755 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 BNIP3LO60238 219 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 RNASEH1O60930 286 aaKnown RBP7.92□□□□□ -1.14
VMP1-204ENST00000587259 FAM153BP0C7A2 387 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 GOLGA6DP0CG33 693 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 GOT1P17174 413 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 MX2P20592 715 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 L1CAMP32004 1257 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 ATP5OP48047 213 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 ITGA8P53708 1063 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 DYNLT1P63172 113 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 ADCY2Q08462 1091 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 GPS1Q13098 491 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 LY6DQ14210 128 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 RTP5Q14D33 572 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 TAF5Q15542 800 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 FAM153CQ494X1 144 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 ZC3H12AQ5D1E8 599 aaKnown RBP7.92□□□□□ -1.14
VMP1-204ENST00000587259 ZNF542PQ5EBM4 170 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 PPP6R3Q5H9R7 873 aaPredicted RBP7.92□□□□□ -1.14
VMP1-204ENST00000587259 MS4A13Q5J8X5 152 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 ARHGAP40Q5TG30 622 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 IZUMO3Q5VZ72 239 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 HIBCHQ6NVY1 386 aaPredicted RBP7.92□□□□□ -1.14
VMP1-204ENST00000587259 DARS2Q6PI48 645 aaKnown RBP7.92□□□□□ -1.14
VMP1-204ENST00000587259 BLOC1S3Q6QNY0 202 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 ZDHHC24Q6UX98 284 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 CENPUQ71F23 418 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 ZNF605Q86T29 641 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 PPIL6Q8IXY8 311 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 IQCKQ8N0W5 287 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 SLC25A45Q8N413 288 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 HJURPQ8NCD3 748 aaPredicted RBP7.92□□□□□ -1.14
VMP1-204ENST00000587259 RTP4Q96DX8 246 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 GDAP1L1Q96MZ0 367 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 CCDC77Q9BR77 488 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 HERPUD2Q9BSE4 406 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 TXLNGYQ9BZA5 131 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 ROPN1BQ9BZX4 212 aaPredicted RBP7.92□□□□□ -1.14
VMP1-204ENST00000587259 KLC2Q9H0B6 622 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 OSBPL2Q9H1P3 480 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 FBRSQ9HAH7 460 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 ROPN1Q9HAT0 212 aaPredicted RBP7.92□□□□□ -1.14
VMP1-204ENST00000587259 DDIT4Q9NX09 232 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 GOLGA6AQ9NYA3 693 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 COX16Q9P0S2 106 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 FAM153AQ9UHL3 310 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 PLAAQ9Y263 795 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 ATP8A1Q9Y2Q0 1164 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 PCDHGA1Q9Y5H4 931 aa7.92□□□□□ -1.14
VMP1-204ENST00000587259 EDDM13A0A1B0GTR0 161 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 EEF2KO00418 725 aaKnown RBP7.91□□□□□ -1.14
VMP1-204ENST00000587259 SLC31A1O15431 190 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 FGF10O15520 208 aaPredicted RBP7.91□□□□□ -1.14
VMP1-204ENST00000587259 RRP8O43159 456 aaKnown RBP7.91□□□□□ -1.14
VMP1-204ENST00000587259 DFNA5O60443 496 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 SPAG6O75602 509 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 LUC7L3O95232 432 aaKnown RBP7.91□□□□□ -1.14
VMP1-204ENST00000587259 LATS1O95835 1130 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 MT-CO3P00414 261 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 IFNB1P01574 187 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 ABHD2P08910 425 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 CD48P09326 243 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 TSHRP16473 764 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 CKMT2P17540 419 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 TACR2P21452 398 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 CCR1P32246 355 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 PHBP35232 272 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 ADRA1BP35368 520 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 ARRB1P49407 418 aaPredicted RBP7.91□□□□□ -1.14
VMP1-204ENST00000587259 CXCR3P49682 368 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 CCR5P51681 352 aa7.91□□□□□ -1.14
VMP1-204ENST00000587259 CLDN2P57739 230 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms