RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 USP4Q13107 963 aa22.32■■□□□ 1.16
CIRBP-208ENST00000586548 ITGA9Q13797 1035 aa22.32■■□□□ 1.16
CIRBP-208ENST00000586548 ZNF77Q15935 545 aa22.32■■□□□ 1.16
CIRBP-208ENST00000586548 TYSND1Q2T9J0 566 aa22.32■■□□□ 1.16
CIRBP-208ENST00000586548 PITRM1Q5JRX3 1037 aa22.32■■□□□ 1.16
CIRBP-208ENST00000586548 FAM45BPQ6NSW5 357 aa22.32■■□□□ 1.16
CIRBP-208ENST00000586548 TBC1D1Q86TI0 1168 aaPredicted RBP22.32■■□□□ 1.16
CIRBP-208ENST00000586548 LDB1Q86U70 411 aaPredicted RBP22.32■■□□□ 1.16
CIRBP-208ENST00000586548 TMEM151AQ8N4L1 468 aa22.32■■□□□ 1.16
CIRBP-208ENST00000586548 TTC8Q8TAM2 541 aa22.32■■□□□ 1.16
CIRBP-208ENST00000586548 FAM45AQ8TCE6 357 aa22.32■■□□□ 1.16
CIRBP-208ENST00000586548 SCYL1Q96KG9 808 aa22.32■■□□□ 1.16
CIRBP-208ENST00000586548 GPR78Q96P69 363 aa22.32■■□□□ 1.16
CIRBP-208ENST00000586548 SIKE1Q9BRV8 207 aa22.32■■□□□ 1.16
CIRBP-208ENST00000586548 TM6SF2Q9BZW4 377 aa22.32■■□□□ 1.16
CIRBP-208ENST00000586548 TBC1D14Q9P2M4 693 aa22.32■■□□□ 1.16
CIRBP-208ENST00000586548 VWA7Q9Y334 891 aa22.32■■□□□ 1.16
CIRBP-208ENST00000586548 CAPN7Q9Y6W3 813 aa22.32■■□□□ 1.16
CIRBP-208ENST00000586548 GBF1Q92538 1859 aa22.32■■□□□ 1.16
CIRBP-208ENST00000586548 ITM2AO43736 263 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 TRIM13O60858 407 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 CA3P07451 260 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 GRIA4P48058 902 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 NTHL1P78549 312 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 ARMC12Q5T9G4 340 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 ELMSAN1Q6PJG2 1045 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 FSTL5Q8N475 847 aaPredicted RBP22.31■■□□□ 1.16
CIRBP-208ENST00000586548 TTC30BQ8N4P2 665 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 PPP4R1Q8TF05 950 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 PPM1EQ8WY54 764 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 NXNL1Q96CM4 212 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 MYO19Q96H55 970 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 INTS10Q9NVR2 710 aaKnown RBP22.31■■□□□ 1.16
CIRBP-208ENST00000586548 OXSMQ9NWU1 459 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 CCDC85CA6NKD9 419 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 GRXCR1A8MXD5 290 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 TMEM114B3SHH9 223 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 TK2O00142 265 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 ZNF197O14709 1029 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 HGSO14964 777 aaPredicted RBP22.31■■□□□ 1.16
CIRBP-208ENST00000586548 PGLSO95336 258 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 PRAMEF12O95522 483 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 SLC8A1P32418 973 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 STC1P52823 247 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 ABCE1P61221 599 aaKnown RBP22.31■■□□□ 1.16
CIRBP-208ENST00000586548 RPL26P61254 145 aaKnown RBP22.31■■□□□ 1.16
CIRBP-208ENST00000586548 DLG1Q12959 904 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 GPM6BQ13491 265 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 GRASPQ7Z6J2 395 aaPredicted RBP22.31■■□□□ 1.16
CIRBP-208ENST00000586548 TMEM25Q86YD3 366 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 C10orf67Q8IYJ2 551 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 EFHBQ8N7U6 833 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 ZNF557Q8N988 423 aaPredicted RBP22.31■■□□□ 1.16
CIRBP-208ENST00000586548 ZNF707Q96C28 371 aaPredicted RBP22.31■■□□□ 1.16
CIRBP-208ENST00000586548 CPSF2Q9P2I0 782 aaKnown RBP22.31■■□□□ 1.16
CIRBP-208ENST00000586548 RPL26L1Q9UNX3 145 aaKnown RBP22.31■■□□□ 1.16
CIRBP-208ENST00000586548 PCDHB9Q9Y5E1 797 aa22.31■■□□□ 1.16
CIRBP-208ENST00000586548 TARM1B6A8C7 271 aa22.3■■□□□ 1.16
CIRBP-208ENST00000586548 SOCS5O75159 536 aa22.3■■□□□ 1.16
CIRBP-208ENST00000586548 LYPLA1O75608 230 aaPredicted RBP22.3■■□□□ 1.16
CIRBP-208ENST00000586548 IGSF6O95976 241 aa22.3■■□□□ 1.16
CIRBP-208ENST00000586548 SBK3P0C264 359 aa22.3■■□□□ 1.16
CIRBP-208ENST00000586548 HLA-FP30511 346 aa22.3■■□□□ 1.16
CIRBP-208ENST00000586548 SKIV2L2P42285 1042 aaKnown RBP22.3■■□□□ 1.16
CIRBP-208ENST00000586548 ABL2P42684 1182 aa22.3■■□□□ 1.16
CIRBP-208ENST00000586548 GLRBP48167 497 aa22.3■■□□□ 1.16
CIRBP-208ENST00000586548 EPHB1P54762 984 aa22.3■■□□□ 1.16
CIRBP-208ENST00000586548 SEMA3AQ14563 771 aa22.3■■□□□ 1.16
CIRBP-208ENST00000586548 FAM83EQ2M2I3 478 aa22.3■■□□□ 1.16
CIRBP-208ENST00000586548 MICALL1Q8N3F8 863 aa22.3■■□□□ 1.16
CIRBP-208ENST00000586548 PIWIL2Q8TC59 973 aaKnown RBP22.3■■□□□ 1.16
CIRBP-208ENST00000586548 SMIM14Q96QK8 99 aa22.3■■□□□ 1.16
CIRBP-208ENST00000586548 SORT1Q99523 831 aa22.3■■□□□ 1.16
CIRBP-208ENST00000586548 MRPL57Q9BQC6 102 aaKnown RBP22.3■■□□□ 1.16
CIRBP-208ENST00000586548 ECT2Q9H8V3 914 aa22.3■■□□□ 1.16
CIRBP-208ENST00000586548 IGSF5Q9NSI5 407 aa22.3■■□□□ 1.16
CIRBP-208ENST00000586548 XPR1Q9UBH6 696 aa22.3■■□□□ 1.16
CIRBP-208ENST00000586548 EVLQ9UI08 416 aaPredicted RBP22.3■■□□□ 1.16
CIRBP-208ENST00000586548 ZFP69BQ9UJL9 534 aa22.3■■□□□ 1.16
CIRBP-208ENST00000586548 BPTFQ12830 3046 aa22.29■■□□□ 1.16
CIRBP-208ENST00000586548 DNAJC6O75061 913 aa22.29■■□□□ 1.16
CIRBP-208ENST00000586548 WISP3O95389 354 aaPredicted RBP22.29■■□□□ 1.16
CIRBP-208ENST00000586548 SLC26A3P40879 764 aa22.29■■□□□ 1.16
CIRBP-208ENST00000586548 ERVK-21P61565 698 aa22.29■■□□□ 1.16
CIRBP-208ENST00000586548 NCALDP61601 193 aa22.29■■□□□ 1.16
CIRBP-208ENST00000586548 BCL2L1Q07817 233 aa22.29■■□□□ 1.16
CIRBP-208ENST00000586548 FAM109BQ6ICB4 259 aaPredicted RBP22.29■■□□□ 1.16
CIRBP-208ENST00000586548 PNPLA1Q8N8W4 532 aa22.29■■□□□ 1.16
CIRBP-208ENST00000586548 HEXDCQ8WVB3 486 aa22.29■■□□□ 1.16
CIRBP-208ENST00000586548 IRF7Q92985 503 aa22.29■■□□□ 1.16
CIRBP-208ENST00000586548 SKA1Q96BD8 255 aa22.29■■□□□ 1.16
CIRBP-208ENST00000586548 OTUB2Q96DC9 234 aa22.29■■□□□ 1.16
CIRBP-208ENST00000586548 TCF12Q99081 682 aa22.29■■□□□ 1.16
CIRBP-208ENST00000586548 WWP1Q9H0M0 922 aa22.29■■□□□ 1.16
CIRBP-208ENST00000586548 MRPL46Q9H2W6 279 aaKnown RBP22.29■■□□□ 1.16
CIRBP-208ENST00000586548 MAGEE1Q9HCI5 957 aa22.29■■□□□ 1.16
CIRBP-208ENST00000586548 GPAMQ9HCL2 828 aa22.29■■□□□ 1.16
CIRBP-208ENST00000586548 POLR3BQ9NW08 1133 aaPredicted RBP22.29■■□□□ 1.16
CIRBP-208ENST00000586548 HEY2Q9UBP5 337 aa22.29■■□□□ 1.16
CIRBP-208ENST00000586548 DNAJC16Q9Y2G8 782 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms