RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 RAVER1Q8IY67 606 aaKnown RBP11.29□□□□□ -0.6
ACTN4-209ENST00000586538 NETO2Q8NC67 525 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 PCDH19Q8TAB3 1148 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 KIAA1524Q8TCG1 905 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 NUS1Q96E22 293 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 UBL7Q96S82 380 aaPredicted RBP11.29□□□□□ -0.6
ACTN4-209ENST00000586538 RBM15Q96T37 977 aaKnown RBP eCLIP11.29□□□□□ -0.6
ACTN4-209ENST00000586538 TRIM7Q9C029 511 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 STRADBQ9C0K7 418 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 PCDH18Q9HCL0 1135 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 CTTNBP2NLQ9P2B4 639 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 GPR34Q9UPC5 381 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 OR1A2Q9Y585 309 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 U3KQA8 63 aa11.29□□□□□ -0.6
ACTN4-209ENST00000586538 A0A087X0T9 212 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 MAFKO60675 156 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 GCATO75600 419 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 FAM228BP0C875 321 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 MYCLP1P12525 358 aaPredicted RBP11.28□□□□□ -0.6
ACTN4-209ENST00000586538 PNLIPP16233 465 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 ZNF30P17039 623 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 CR2P20023 1033 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 AMPD1P23109 780 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 IL1R2P27930 398 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 TEAD1P28347 426 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 HNRNPH3P31942 346 aaKnown RBP11.28□□□□□ -0.6
ACTN4-209ENST00000586538 CASP14P31944 242 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 TRIM23P36406 574 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 CLDN6P56747 220 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 RALGDSQ12967 914 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 C1orf61Q13536 156 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 SLC18A3Q16572 532 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 IFI16Q16666 785 aaKnown RBP11.28□□□□□ -0.6
ACTN4-209ENST00000586538 ALG11Q2TAA5 492 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 ODF2Q5BJF6 829 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 TPRG1LQ5T0D9 272 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 ARHGAP36Q6ZRI8 547 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 RD3Q7Z3Z2 195 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 SLC35F3Q8IY50 421 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 KCTD6Q8NC69 237 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 WDR36Q8NI36 951 aaKnown RBP11.28□□□□□ -0.6
ACTN4-209ENST00000586538 FATE1Q969F0 183 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 TMEM74Q96NL1 305 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 CCDC3Q9BQI4 270 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 GSDMCQ9BYG8 508 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 DPH1Q9BZG8 443 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 SYNDIG1Q9H7V2 258 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 IFNKQ9P0W0 207 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 GULP1Q9UBP9 304 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 B4GALT6Q9UBX8 382 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 PCDHB1Q9Y5F3 818 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 PCDHGA8Q9Y5G5 932 aa11.28□□□□□ -0.6
ACTN4-209ENST00000586538 CCDC187A0A096LP49 1063 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 TEX51A0A1B0GUA7 166 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 SSU72P8A0A1W2PR75 194 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 CAPN8A6NHC0 703 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 GYPCP04921 128 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 MPOP05164 745 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 ITIH2P19823 946 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 TGM2P21980 687 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 MAN1A1P33908 653 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 GARSP41250 739 aaKnown RBP11.27□□□□□ -0.61
ACTN4-209ENST00000586538 EPHB1P54762 984 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 ITKQ08881 620 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 ILF3Q12906 894 aaKnown RBP eCLIP11.27□□□□□ -0.61
ACTN4-209ENST00000586538 BIRC2Q13490 618 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 C3orf38Q5JPI3 329 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 SPECC1LQ69YQ0 1117 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 PNCKQ6P2M8 343 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 TAF8Q7Z7C8 310 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 ZSWIM9Q86XI8 627 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 VSIG1Q86XK7 387 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 LSM14AQ8ND56 463 aaKnown RBP11.27□□□□□ -0.61
ACTN4-209ENST00000586538 OR8K1Q8NGG5 319 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 FAM71BQ8TC56 605 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 KCNE4Q8WWG9 221 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 TSACCQ96A04 125 aaPredicted RBP11.27□□□□□ -0.61
ACTN4-209ENST00000586538 TMEM159Q96B96 161 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 SCRN2Q96FV2 425 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 GFM1Q96RP9 751 aaKnown RBP11.27□□□□□ -0.61
ACTN4-209ENST00000586538 CLPBQ9H078 707 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 TCEAL2Q9H3H9 227 aaPredicted RBP11.27□□□□□ -0.61
ACTN4-209ENST00000586538 MOSPD1Q9UJG1 213 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 LAMA5O15230 3695 aa11.27□□□□□ -0.61
ACTN4-209ENST00000586538 PRSS38A1L453 326 aa11.26□□□□□ -0.61
ACTN4-209ENST00000586538 ZNF487B1APH4 448 aa11.26□□□□□ -0.61
ACTN4-209ENST00000586538 TK2O00142 265 aa11.26□□□□□ -0.61
ACTN4-209ENST00000586538 MATN3O15232 486 aa11.26□□□□□ -0.61
ACTN4-209ENST00000586538 TLX3O43711 291 aaPredicted RBP11.26□□□□□ -0.61
ACTN4-209ENST00000586538 AKR1B10O60218 316 aa11.26□□□□□ -0.61
ACTN4-209ENST00000586538 PROSCO94903 275 aa11.26□□□□□ -0.61
ACTN4-209ENST00000586538 HEXIM1O94992 359 aaKnown RBP11.26□□□□□ -0.61
ACTN4-209ENST00000586538 PGLSO95336 258 aa11.26□□□□□ -0.61
ACTN4-209ENST00000586538 GLB1P16278 677 aa11.26□□□□□ -0.61
ACTN4-209ENST00000586538 CCNCP24863 283 aa11.26□□□□□ -0.61
ACTN4-209ENST00000586538 ARHGAP25P42331 645 aa11.26□□□□□ -0.61
ACTN4-209ENST00000586538 TMPRSS3P57727 454 aa11.26□□□□□ -0.61
ACTN4-209ENST00000586538 RPL26P61254 145 aaKnown RBP11.26□□□□□ -0.61
ACTN4-209ENST00000586538 PAFAH1B3Q15102 231 aaKnown RBP11.26□□□□□ -0.61
ACTN4-209ENST00000586538 CNGA3Q16281 694 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms