RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 Q6ZVU0 165 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 CCDC91Q7Z6B0 441 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 IGDCC3Q8IVU1 814 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 TRIM42Q8IWZ5 723 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 C4orf33Q8N1A6 199 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 STK40Q8N2I9 435 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 OR6K2Q8NGY2 324 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 TTC8Q8TAM2 541 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 DCAKDQ8WVC6 231 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 PBXIP1Q96AQ6 731 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 TADA1Q96BN2 335 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 ALG14Q96F25 216 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 ATXN7L3BQ96GX2 97 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 MSANTD3Q96H12 275 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 ZNF419Q96HQ0 510 aaPredicted RBP6.21□□□□□ -1.42
LIG3-206ENST00000586058 ELMO2Q96JJ3 720 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 ZFYVE19Q96K21 471 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 MYADMQ96S97 322 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 PAIP2Q9BPZ3 127 aaKnown RBP6.21□□□□□ -1.42
LIG3-206ENST00000586058 C19orf43Q9BQ61 176 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 FAM83CQ9BQN1 747 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 WDR83Q9BRX9 315 aaKnown RBP6.21□□□□□ -1.42
LIG3-206ENST00000586058 DHRS4Q9BTZ2 278 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 RHOJQ9H4E5 214 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 SUV39H2Q9H5I1 410 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 ZFYVE1Q9HBF4 777 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 MAGEE1Q9HCI5 957 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 PCMTD2Q9NV79 361 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 INTS10Q9NVR2 710 aaKnown RBP6.21□□□□□ -1.42
LIG3-206ENST00000586058 NLE1Q9NVX2 485 aaPredicted RBP6.21□□□□□ -1.42
LIG3-206ENST00000586058 POLR3BQ9NW08 1133 aaPredicted RBP6.21□□□□□ -1.42
LIG3-206ENST00000586058 ELOVL2Q9NXB9 296 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 MOCS1Q9NZB8 636 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 PKD2L2Q9NZM6 624 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 CLEC1BQ9P126 229 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 EPS15L1Q9UBC2 864 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 SUN2Q9UH99 717 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 APPL1Q9UKG1 709 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 TLK1Q9UKI8 766 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 ADAM21Q9UKJ8 722 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 INTS6Q9UL03 887 aaKnown RBP6.21□□□□□ -1.42
LIG3-206ENST00000586058 ANKRD6Q9Y2G4 727 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 USP15Q9Y4E8 981 aaPredicted RBP6.21□□□□□ -1.42
LIG3-206ENST00000586058 ACTL7AQ9Y615 435 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 NUMBLQ9Y6R0 609 aa6.21□□□□□ -1.42
LIG3-206ENST00000586058 TP53BP1Q12888 1972 aaPredicted RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 A0A0J9YYE9 177 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 ZCWPW2A0A1B0GU75 182 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 UBA6A0AVT1 1052 aaPredicted RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 TTC24A2A3L6 582 aaPredicted RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 PABPN1LA6NDY0 278 aaKnown RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 WASH3PC4AMC7 463 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 E5RI56 91 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 K7ERQ8 282 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 KPNA3O00505 521 aaPredicted RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 NRG2O14511 850 aaPredicted RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 NEMP1O14524 444 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 PRPF4O43172 522 aaKnown RBP eCLIP6.2□□□□□ -1.42
LIG3-206ENST00000586058 SMAD6O43541 496 aaKnown RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 SYNCRIPO60506 623 aaKnown RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 NDUFS3O75489 264 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 KAT7O95251 611 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 MT-CO1P00395 513 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 TRBC1P01850 177 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 APOA4P06727 396 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 PYGLP06737 847 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 EPHX1P07099 455 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 GSTA1P08263 222 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 PIRTP0C851 137 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 CHN1P15882 459 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 STMN1P16949 149 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 SAT1P21673 171 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 KCNA5P22460 613 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 SP100P23497 879 aaPredicted RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 GJA4P35212 333 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 SPAM1P38567 509 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 MDH1P40925 334 aaKnown RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 ABL2P42684 1182 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 SLC1A2P43004 574 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 CTSOP43234 321 aaPredicted RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 SUOXP51687 545 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 SLC18A1P54219 525 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 TMPRSS15P98073 1019 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 ASPHQ12797 758 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 ITGA9Q13797 1035 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 BMPR2Q13873 1038 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 ELAVL3Q14576 367 aaKnown RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 GRIN2CQ14957 1233 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 SMAD1Q15797 465 aaKnown RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 CNGA3Q16281 694 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 TSNAXIP1Q2TAA8 658 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 PUS10Q3MIT2 529 aaKnown RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 FAM182AQ5T1J6 154 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 MROH9Q5TGP6 573 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 PRPF38BQ5VTL8 546 aaKnown RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 FAM46CQ5VWP2 391 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 LYPLAL1Q5VWZ2 237 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 DENND5AQ6IQ26 1287 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 FAM45BPQ6NSW5 357 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 NEPROQ6NW34 567 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms