RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 SLC25A45Q8N413 288 aa11.23□□□□□ -0.61
CCDC47-206ENST00000584112 HCAR2Q8TDS4 363 aa11.23□□□□□ -0.61
CCDC47-206ENST00000584112 CXorf40AQ8TE69 158 aa11.23□□□□□ -0.61
CCDC47-206ENST00000584112 ZNF653Q96CK0 615 aa11.23□□□□□ -0.61
CCDC47-206ENST00000584112 BMFQ96LC9 184 aa11.23□□□□□ -0.61
CCDC47-206ENST00000584112 NAP1L5Q96NT1 182 aaPredicted RBP11.23□□□□□ -0.61
CCDC47-206ENST00000584112 KLF6Q99612 283 aaPredicted RBP11.23□□□□□ -0.61
CCDC47-206ENST00000584112 DUSP23Q9BVJ7 150 aa11.23□□□□□ -0.61
CCDC47-206ENST00000584112 KLC2Q9H0B6 622 aa11.23□□□□□ -0.61
CCDC47-206ENST00000584112 LRRC19Q9H756 370 aa11.23□□□□□ -0.61
CCDC47-206ENST00000584112 MRPL47Q9HD33 250 aaKnown RBP11.23□□□□□ -0.61
CCDC47-206ENST00000584112 GPR27Q9NS67 375 aa11.23□□□□□ -0.61
CCDC47-206ENST00000584112 DNAJC28Q9NX36 388 aa11.23□□□□□ -0.61
CCDC47-206ENST00000584112 NLGN3Q9NZ94 848 aa11.23□□□□□ -0.61
CCDC47-206ENST00000584112 CNOT8Q9UFF9 292 aaKnown RBP11.23□□□□□ -0.61
CCDC47-206ENST00000584112 VPS4AQ9UN37 437 aa11.23□□□□□ -0.61
CCDC47-206ENST00000584112 PCDHGA8Q9Y5G5 932 aa11.23□□□□□ -0.61
CCDC47-206ENST00000584112 TOR1BO14657 336 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 RIOK3O14730 519 aaKnown RBP11.22□□□□□ -0.61
CCDC47-206ENST00000584112 AREL1O15033 823 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 RAD51BO15315 384 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 FFAR2O15552 330 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 PRAMEF11O60813 436 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 TM7SF2O76062 418 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 CSF2P04141 144 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 C8BP07358 591 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 NME1P15531 152 aaKnown RBP11.22□□□□□ -0.61
CCDC47-206ENST00000584112 PDE1CQ14123 709 aaPredicted RBP11.22□□□□□ -0.61
CCDC47-206ENST00000584112 PTK2BQ14289 1009 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 NR1I3Q14994 352 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 TDRD12Q587J7 1177 aaKnown RBP11.22□□□□□ -0.61
CCDC47-206ENST00000584112 CFAP58Q5T655 872 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 VPS36Q86VN1 386 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 ARL14Q8N4G2 192 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 IQCDQ96DY2 449 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 SNRNP25Q9BV90 132 aaKnown RBP11.22□□□□□ -0.61
CCDC47-206ENST00000584112 PDFQ9HBH1 243 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 USP29Q9HBJ7 922 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 GPATCH2LQ9NWQ4 482 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 UCKL1Q9NWZ5 548 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 LHX3Q9UBR4 397 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 PCSK1NQ9UHG2 260 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 GGT7Q9UJ14 662 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 ITM2BQ9Y287 266 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 ENTPD2Q9Y5L3 495 aa11.22□□□□□ -0.61
CCDC47-206ENST00000584112 BZW2Q9Y6E2 419 aaKnown RBP11.22□□□□□ -0.61
CCDC47-206ENST00000584112 STAB1Q9NY15 2570 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 DDX3XO00571 662 aaKnown RBP eCLIP11.21□□□□□ -0.611e-27■■■□□ 18.3
CCDC47-206ENST00000584112 SCAMP1O15126 338 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 SPINT1O43278 529 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 CKMT1AP12532 417 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 MIPP30301 263 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 SLC5A2P31639 672 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 HCAR3P49019 387 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 THOP1P52888 689 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 PFN3P60673 137 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 YPEL5P62699 121 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 FZD2Q14332 565 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 CYTH1Q15438 398 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 KLHL40Q2TBA0 621 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 PPP6R3Q5H9R7 873 aaPredicted RBP11.21□□□□□ -0.61
CCDC47-206ENST00000584112 E4F1Q66K89 784 aaPredicted RBP11.21□□□□□ -0.61
CCDC47-206ENST00000584112 ERAP2Q6P179 960 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 BORAQ6PGQ7 559 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 BRAT1Q6PJG6 821 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 RFX8Q6ZV50 586 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 C9orf43Q8TAL5 461 aaPredicted RBP11.21□□□□□ -0.61
CCDC47-206ENST00000584112 BTN2A2Q8WVV5 523 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 VOPP1Q96AW1 172 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 CELF6Q96J87 481 aaKnown RBP11.21□□□□□ -0.61
CCDC47-206ENST00000584112 EXOC2Q96KP1 924 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 ZNF641Q96N77 438 aaPredicted RBP11.21□□□□□ -0.61
CCDC47-206ENST00000584112 TUBGCP5Q96RT8 1024 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 PEBP4Q96S96 227 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 KCTD15Q96SI1 283 aaPredicted RBP11.21□□□□□ -0.61
CCDC47-206ENST00000584112 ISCUQ9H1K1 167 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 SUV39H2Q9H5I1 410 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 SP110Q9HB58 689 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 NCKIPSDQ9NZQ3 722 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 CSNK1G3Q9Y6M4 447 aa11.21□□□□□ -0.61
CCDC47-206ENST00000584112 A0A1W2PQJ5 194 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 TSPAN11A1L157 253 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 SYCE3A1L190 88 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 GOLGA6L19H0YKK7 550 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 H3BRJ5 948 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 J3KR12 359 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 MMP20O60882 483 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 LRCH4O75427 683 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 PALMO75781 387 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 PIGNO95427 931 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 GP1BAP07359 652 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 GIMD1P0DJR0 217 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 SKILP12757 684 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 TIMP2P16035 220 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 ERCC2P18074 760 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 PTMSP20962 102 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 SERPINA4P29622 427 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 PCK1P35558 622 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 CSNK1DP48730 415 aa11.2□□□□□ -0.62
CCDC47-206ENST00000584112 PAPOLAP51003 745 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms