RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 ATL2Q8NHH9 583 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 TPCN2Q8NHX9 752 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 APOLD1Q96LR9 279 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 IL12RB2Q99665 862 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 GOLPH3Q9H4A6 298 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 EVA1BQ9NVM1 165 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 SPEGQ15772 3267 aa20.48■□□□□ 0.87
SS18-224ENST00000584083 MYLKQ15746 1914 aa20.47■□□□□ 0.87
SS18-224ENST00000584083 KCNK1O00180 336 aa20.47■□□□□ 0.87
SS18-224ENST00000584083 HEXIM1O94992 359 aaKnown RBP20.47■□□□□ 0.87
SS18-224ENST00000584083 NDUFA10O95299 355 aa20.47■□□□□ 0.87
SS18-224ENST00000584083 HLA-DQB2P05538 268 aa20.47■□□□□ 0.87
SS18-224ENST00000584083 PDHA1P08559 390 aa20.47■□□□□ 0.87
SS18-224ENST00000584083 MYF5P13349 255 aa20.47■□□□□ 0.87
SS18-224ENST00000584083 BLKP51451 505 aa20.47■□□□□ 0.87
SS18-224ENST00000584083 EPHB1P54762 984 aa20.47■□□□□ 0.87
SS18-224ENST00000584083 PPIDQ08752 370 aaKnown RBP20.47■□□□□ 0.87
SS18-224ENST00000584083 AP1B1Q10567 949 aa20.47■□□□□ 0.87
SS18-224ENST00000584083 ARHGEF7Q14155 803 aa20.47■□□□□ 0.87
SS18-224ENST00000584083 PDK1Q15118 436 aa20.47■□□□□ 0.87
SS18-224ENST00000584083 DEFB133Q30KQ1 61 aa20.47■□□□□ 0.87
SS18-224ENST00000584083 MFSD7Q6UXD7 560 aa20.47■□□□□ 0.87
SS18-224ENST00000584083 NPNTQ6UXI9 565 aa20.47■□□□□ 0.87
SS18-224ENST00000584083 RD3Q7Z3Z2 195 aa20.47■□□□□ 0.87
SS18-224ENST00000584083 TMPRSS12Q86WS5 348 aa20.47■□□□□ 0.87
SS18-224ENST00000584083 KDF1Q8NAX2 398 aaPredicted RBP20.47■□□□□ 0.87
SS18-224ENST00000584083 ZCCHC14Q8WYQ9 949 aaKnown RBP20.47■□□□□ 0.87
SS18-224ENST00000584083 TSACCQ96A04 125 aaPredicted RBP20.47■□□□□ 0.87
SS18-224ENST00000584083 SCRN2Q96FV2 425 aa20.47■□□□□ 0.87
SS18-224ENST00000584083 COQ10AQ96MF6 247 aa20.47■□□□□ 0.87
SS18-224ENST00000584083 PNMA8BQ9ULN7 279 aaPredicted RBP20.47■□□□□ 0.87
SS18-224ENST00000584083 A0A0A6YYK5 440 aaPredicted RBP20.46■□□□□ 0.87
SS18-224ENST00000584083 NPIPB15A6NHN6 443 aaPredicted RBP20.46■□□□□ 0.87
SS18-224ENST00000584083 CACNB4O00305 520 aaPredicted RBP20.46■□□□□ 0.87
SS18-224ENST00000584083 PPP1R12AO14974 1030 aaPredicted RBP20.46■□□□□ 0.87
SS18-224ENST00000584083 PSTPIP1O43586 416 aa20.46■□□□□ 0.87
SS18-224ENST00000584083 RASGRP1O95267 797 aa20.46■□□□□ 0.87
SS18-224ENST00000584083 ALPIP09923 528 aa20.46■□□□□ 0.87
SS18-224ENST00000584083 CKMT1AP12532 417 aa20.46■□□□□ 0.87
SS18-224ENST00000584083 CTSEP14091 401 aa20.46■□□□□ 0.87
SS18-224ENST00000584083 JUPP14923 745 aa20.46■□□□□ 0.87
SS18-224ENST00000584083 GM2AP17900 193 aa20.46■□□□□ 0.87
SS18-224ENST00000584083 CA4P22748 312 aa20.46■□□□□ 0.87
SS18-224ENST00000584083 CLDN6P56747 220 aa20.46■□□□□ 0.87
SS18-224ENST00000584083 PTPRRQ15256 657 aa20.46■□□□□ 0.87
SS18-224ENST00000584083 ALG11Q2TAA5 492 aa20.46■□□□□ 0.87
SS18-224ENST00000584083 ALG1LQ6GMV1 187 aa20.46■□□□□ 0.87
SS18-224ENST00000584083 ZCCHC8Q6NZY4 707 aaKnown RBP20.46■□□□□ 0.87
SS18-224ENST00000584083 PIH1D2Q8WWB5 315 aa20.46■□□□□ 0.87
SS18-224ENST00000584083 NUS1Q96E22 293 aa20.46■□□□□ 0.87
SS18-224ENST00000584083 WDR92Q96MX6 357 aa20.46■□□□□ 0.87
SS18-224ENST00000584083 LRRC61Q9BV99 259 aa20.46■□□□□ 0.87
SS18-224ENST00000584083 KLQ9UEF7 1012 aa20.46■□□□□ 0.87
SS18-224ENST00000584083 CHKBQ9Y259 395 aa20.46■□□□□ 0.87
SS18-224ENST00000584083 LRP4O75096 1905 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 IGF2RP11717 2491 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 GCATO75600 419 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 ANXA6P08133 673 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 FECHP22830 423 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 LHCGRP22888 699 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 HNF1BP35680 557 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 CDKN2BP42772 138 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 DUSP3P51452 185 aaPredicted RBP20.45■□□□□ 0.86
SS18-224ENST00000584083 HK3P52790 923 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 SRP54P61011 504 aaKnown RBP20.45■□□□□ 0.86
SS18-224ENST00000584083 IFI35P80217 286 aaPredicted RBP20.45■□□□□ 0.86
SS18-224ENST00000584083 E2F1Q01094 437 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 NIPAL4Q0D2K0 466 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 TFDP2Q14188 446 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 IHHQ14623 411 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 LLGL1Q15334 1064 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 TCEA2Q15560 299 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 KAZNQ674X7 775 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 PNCKQ6P2M8 343 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 HSD11B1LQ7Z5J1 315 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 DAAM2Q86T65 1068 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 TSPAN33Q86UF1 283 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 FAM181AQ8N9Y4 354 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 ARRDC2Q8TBH0 407 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 FUBP1Q96AE4 644 aaKnown RBP20.45■□□□□ 0.86
SS18-224ENST00000584083 TBATAQ96M53 351 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 MCCC1Q96RQ3 725 aaPredicted RBP20.45■□□□□ 0.86
SS18-224ENST00000584083 KCTD5Q9NXV2 234 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 SEPT10Q9P0V9 454 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 ZMIZ1Q9ULJ6 1067 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 DOLKQ9UPQ8 538 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 PPIL1Q9Y3C6 166 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 CACNA1BQ00975 2339 aa20.45■□□□□ 0.86
SS18-224ENST00000584083 GOLGA6CA6NDK9 693 aa20.44■□□□□ 0.86
SS18-224ENST00000584083 GOLGA6BA6NDN3 693 aa20.44■□□□□ 0.86
SS18-224ENST00000584083 LMO7DNF2Z398 122 aa20.44■□□□□ 0.86
SS18-224ENST00000584083 TPP1O14773 563 aa20.44■□□□□ 0.86
SS18-224ENST00000584083 FZD6O60353 706 aa20.44■□□□□ 0.86
SS18-224ENST00000584083 GOLGA6DP0CG33 693 aa20.44■□□□□ 0.86
SS18-224ENST00000584083 TSHRP16473 764 aa20.44■□□□□ 0.86
SS18-224ENST00000584083 KELP23276 732 aa20.44■□□□□ 0.86
SS18-224ENST00000584083 ETV3P41162 512 aa20.44■□□□□ 0.86
SS18-224ENST00000584083 NAP1L1P55209 391 aaKnown RBP20.44■□□□□ 0.86
SS18-224ENST00000584083 ZBTB17Q13105 803 aa20.44■□□□□ 0.86
SS18-224ENST00000584083 HES3Q5TGS1 186 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms