RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ADRB1P08588 477 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 CCDC175P0C221 793 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 PYGMP11217 842 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 ATP5OP48047 213 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 SKOR1P84550 965 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 ZNF211Q13398 564 aaPredicted RBP12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 PTK2BQ14289 1009 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 FZD2Q14332 565 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 IHHQ14623 411 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 PTPRRQ15256 657 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 CNGA3Q16281 694 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 AADACL2Q6P093 401 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 PARGQ86W56 976 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 RNF10Q8N5U6 811 aaKnown RBP12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 LPCAT1Q8NF37 534 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 SAP25Q8TEE9 199 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 PIH1D2Q8WWB5 315 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 SCRN2Q96FV2 425 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 QKIQ96PU8 341 aaKnown RBP eCLIP12.64□□□□□ -0.392e-13■■■■■ 29.8
SMARCE1-218ENST00000582955 RBM15Q96T37 977 aaKnown RBP eCLIP12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 CDC6Q99741 560 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 HERPUD2Q9BSE4 406 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 PCDH9Q9HC56 1237 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 GPR27Q9NS67 375 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 LRRK1Q38SD2 2015 aa12.64□□□□□ -0.39
SMARCE1-218ENST00000582955 A0A0J9YYE9 177 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 SPTY2D1-AS1A0A0U1RR47 76 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 HACD1B0YJ81 288 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 H3BM21 787 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 MTSS1O43312 755 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 TJP3O95049 919 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 TRBC1P01850 177 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 MMP2P08253 660 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 LHCGRP22888 699 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 PTPN3P26045 913 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 PTPN7P35236 360 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 HNF1BP35680 557 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 YPEL5P62699 121 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 CCZ1BP86790 482 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 CCZ1P86791 482 aaPredicted RBP12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 OTUD4Q01804 1114 aaKnown RBP12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 INPP5AQ14642 412 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 AGERQ15109 404 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 NOMO1Q15155 1222 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 PCSK7Q16549 785 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 TEX44Q53QW1 395 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 TPRG1LQ5T0D9 272 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 TSPAN33Q86UF1 283 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 EID2Q8N6I1 236 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 ACTL9Q8TC94 416 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 HTR3CQ8WXA8 447 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 NUS1Q96E22 293 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 IFT43Q96FT9 208 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 IMP4Q96G21 291 aaKnown RBP12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 SMIM14Q96QK8 99 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 MCCC1Q96RQ3 725 aaPredicted RBP12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 SLC25A51Q9H1U9 297 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 GLOD4Q9HC38 313 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 LZTFL1Q9NQ48 299 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 KLHL8Q9P2G9 620 aaPredicted RBP12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 FTSJ1Q9UET6 329 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 EFR3BQ9Y2G0 817 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 PPIL1Q9Y3C6 166 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 OR1A2Q9Y585 309 aa12.63□□□□□ -0.39
SMARCE1-218ENST00000582955 A0A0U1RQS6 177 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 GOLGA6CA6NDK9 693 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 GOLGA6BA6NDN3 693 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 CAPN8A6NHC0 703 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 TOR1BO14657 336 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 DDX3YO15523 660 aaKnown RBP12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 GOLGA6DP0CG33 693 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 JUNDP17535 347 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 DGKAP23743 735 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 HTR1BP28222 390 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 EIF3EP60228 445 aaKnown RBP12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 RPL26P61254 145 aaKnown RBP12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 HNRNPKP61978 463 aaKnown RBP eCLIP12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 WASHC5Q12768 1159 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 FOXC1Q12948 553 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 XRCC4Q13426 336 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 MTM1Q13496 603 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 GALNT3Q14435 633 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 HS1BP3Q53T59 392 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 LRRC66Q68CR7 880 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 MACC1Q6ZN28 852 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 PID1Q7Z2X4 250 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 KDELC2Q7Z4H8 507 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 HSD11B1LQ7Z5J1 315 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 PLA2G15Q8NCC3 412 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 SPATA22Q8NHS9 363 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 BAHD1Q8TBE0 780 aaPredicted RBP12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 TEKT5Q96M29 485 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 COQ10AQ96MF6 247 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 FAM118BQ9BPY3 351 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 FERMT1Q9BQL6 677 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 APOOQ9BUR5 198 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 ADGRE3Q9BY15 652 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 CAAP1Q9H8G2 361 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 UCKL1Q9NWZ5 548 aa12.62□□□□□ -0.39
SMARCE1-218ENST00000582955 GOLGA6AQ9NYA3 693 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms