RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 SCG3Q8WXD2 468 aaKnown RBP21.01■□□□□ 0.95
CCDC42-203ENST00000581598 HSPH1Q92598 858 aa21.01■□□□□ 0.95
CCDC42-203ENST00000581598 WDR92Q96MX6 357 aa21.01■□□□□ 0.95
CCDC42-203ENST00000581598 NUDCD1Q96RS6 583 aa21.01■□□□□ 0.95
CCDC42-203ENST00000581598 SHROOM3Q8TF72 1996 aa21.01■□□□□ 0.95
CCDC42-203ENST00000581598 A0A087X0T9 212 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 USP12O75317 370 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 RECQL5O94762 991 aaPredicted RBP21■□□□□ 0.95
CCDC42-203ENST00000581598 PRKCGP05129 697 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 ELFN1P0C7U0 828 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 FAM228BP0C875 321 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 GM2AP17900 193 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 TRIM23P36406 574 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 SRP54P61011 504 aaKnown RBP21■□□□□ 0.95
CCDC42-203ENST00000581598 ZNF235Q14590 738 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 SOWAHCQ53LP3 525 aaPredicted RBP21■□□□□ 0.95
CCDC42-203ENST00000581598 LRRC49Q8IUZ0 686 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 HID1Q8IV36 788 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 BBS5Q8N3I7 341 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 ARL10Q8N8L6 244 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 FAM71BQ8TC56 605 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 TSACCQ96A04 125 aaPredicted RBP21■□□□□ 0.95
CCDC42-203ENST00000581598 MGME1Q9BQP7 344 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 NUP85Q9BW27 656 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 KCNF1Q9H3M0 494 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 POLR1BQ9H9Y6 1135 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 PCDH18Q9HCL0 1135 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 KCTD5Q9NXV2 234 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 KLQ9UEF7 1012 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 ANAPC7Q9UJX3 599 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 PADI4Q9UM07 663 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 OR1A2Q9Y585 309 aa21■□□□□ 0.95
CCDC42-203ENST00000581598 IGSF10Q6WRI0 2623 aa20.99■□□□□ 0.95
CCDC42-203ENST00000581598 TNFRSF10CO14798 259 aa20.99■□□□□ 0.95
CCDC42-203ENST00000581598 PCCBP05166 539 aa20.99■□□□□ 0.95
CCDC42-203ENST00000581598 CTSEP14091 401 aa20.99■□□□□ 0.95
CCDC42-203ENST00000581598 ITPKBP27987 946 aa20.99■□□□□ 0.95
CCDC42-203ENST00000581598 CDH6P55285 790 aa20.99■□□□□ 0.95
CCDC42-203ENST00000581598 ERVPABLB-1P60509 514 aa20.99■□□□□ 0.95
CCDC42-203ENST00000581598 PERM1Q5SV97 790 aa20.99■□□□□ 0.95
CCDC42-203ENST00000581598 TXNRD3NBQ6F5E7 133 aa20.99■□□□□ 0.95
CCDC42-203ENST00000581598 ALKBH5Q6P6C2 394 aaKnown RBP20.99■□□□□ 0.95
CCDC42-203ENST00000581598 RBM44Q6ZP01 1051 aaKnown RBP20.99■□□□□ 0.95
CCDC42-203ENST00000581598 GKN2Q86XP6 184 aa20.99■□□□□ 0.95
CCDC42-203ENST00000581598 PGBD5Q8N414 524 aa20.99■□□□□ 0.95
CCDC42-203ENST00000581598 PLA2G15Q8NCC3 412 aa20.99■□□□□ 0.95
CCDC42-203ENST00000581598 RBM15Q96T37 977 aaKnown RBP eCLIP20.99■□□□□ 0.95
CCDC42-203ENST00000581598 NHEJ1Q9H9Q4 299 aaPredicted RBP20.99■□□□□ 0.95
CCDC42-203ENST00000581598 NENFQ9UMX5 172 aa20.99■□□□□ 0.95
CCDC42-203ENST00000581598 DOLKQ9UPQ8 538 aa20.99■□□□□ 0.95
CCDC42-203ENST00000581598 MYO1FO00160 1098 aa20.98■□□□□ 0.95
CCDC42-203ENST00000581598 CACNB4O00305 520 aaPredicted RBP20.98■□□□□ 0.95
CCDC42-203ENST00000581598 TNFP01375 233 aa20.98■□□□□ 0.95
CCDC42-203ENST00000581598 MPOP05164 745 aa20.98■□□□□ 0.95
CCDC42-203ENST00000581598 CELA2BP08218 269 aaPredicted RBP20.98■□□□□ 0.95
CCDC42-203ENST00000581598 KELP23276 732 aa20.98■□□□□ 0.95
CCDC42-203ENST00000581598 NFKBIAP25963 317 aa20.98■□□□□ 0.95
CCDC42-203ENST00000581598 GABREP78334 506 aa20.98■□□□□ 0.95
CCDC42-203ENST00000581598 CCDC170Q8IYT3 715 aa20.98■□□□□ 0.95
CCDC42-203ENST00000581598 ATPAF2Q8N5M1 289 aa20.98■□□□□ 0.95
CCDC42-203ENST00000581598 PAF1Q8N7H5 531 aa20.98■□□□□ 0.95
CCDC42-203ENST00000581598 OR56A4Q8NGH8 313 aa20.98■□□□□ 0.95
CCDC42-203ENST00000581598 NSMCE1Q8WV22 266 aa20.98■□□□□ 0.95
CCDC42-203ENST00000581598 FUBP1Q96AE4 644 aaKnown RBP20.98■□□□□ 0.95
CCDC42-203ENST00000581598 HIC2Q96JB3 615 aa20.98■□□□□ 0.95
CCDC42-203ENST00000581598 BTBD6Q96KE9 485 aa20.98■□□□□ 0.95
CCDC42-203ENST00000581598 COQ10AQ96MF6 247 aa20.98■□□□□ 0.95
CCDC42-203ENST00000581598 PRORYQ9H606 182 aa20.98■□□□□ 0.95
CCDC42-203ENST00000581598 B4GALT6Q9UBX8 382 aa20.98■□□□□ 0.95
CCDC42-203ENST00000581598 ENTPD2Q9Y5L3 495 aa20.98■□□□□ 0.95
CCDC42-203ENST00000581598 SOWAHDA6NJG2 315 aa20.97■□□□□ 0.95
CCDC42-203ENST00000581598 IL4RP24394 825 aa20.97■□□□□ 0.95
CCDC42-203ENST00000581598 HADHQ16836 314 aaKnown RBP20.97■□□□□ 0.95
CCDC42-203ENST00000581598 CBARPQ8N350 705 aaPredicted RBP20.97■□□□□ 0.95
CCDC42-203ENST00000581598 ZNF248Q8NDW4 579 aa20.97■□□□□ 0.95
CCDC42-203ENST00000581598 OR6C4Q8NGE1 309 aa20.97■□□□□ 0.95
CCDC42-203ENST00000581598 PCDH19Q8TAB3 1148 aa20.97■□□□□ 0.95
CCDC42-203ENST00000581598 PDXPQ96GD0 296 aa20.97■□□□□ 0.95
CCDC42-203ENST00000581598 CRELD1Q96HD1 420 aa20.97■□□□□ 0.95
CCDC42-203ENST00000581598 NOD2Q9HC29 1040 aa20.97■□□□□ 0.95
CCDC42-203ENST00000581598 PHTF1Q9UMS5 762 aa20.97■□□□□ 0.95
CCDC42-203ENST00000581598 PCDHGC4Q9Y5F7 938 aa20.97■□□□□ 0.95
CCDC42-203ENST00000581598 NTN3O00634 580 aaPredicted RBP20.96■□□□□ 0.95
CCDC42-203ENST00000581598 ARHGAP6O43182 974 aa20.96■□□□□ 0.95
CCDC42-203ENST00000581598 NRDCO43847 1150 aa20.96■□□□□ 0.95
CCDC42-203ENST00000581598 CPP00450 1065 aa20.96■□□□□ 0.95
CCDC42-203ENST00000581598 VIPR1P32241 457 aa20.96■□□□□ 0.95
CCDC42-203ENST00000581598 ARSEP51690 589 aa20.96■□□□□ 0.95
CCDC42-203ENST00000581598 PCBP4P57723 403 aaKnown RBP20.96■□□□□ 0.95
CCDC42-203ENST00000581598 KRT81Q14533 505 aa20.96■□□□□ 0.95
CCDC42-203ENST00000581598 CCDC122Q5T0U0 273 aa20.96■□□□□ 0.95
CCDC42-203ENST00000581598 MARC1Q5VT66 337 aa20.96■□□□□ 0.95
CCDC42-203ENST00000581598 RAD9BQ6WBX8 426 aa20.96■□□□□ 0.95
CCDC42-203ENST00000581598 TEX26Q8N6G2 289 aa20.96■□□□□ 0.95
CCDC42-203ENST00000581598 KYQ8NBH2 561 aa20.96■□□□□ 0.95
CCDC42-203ENST00000581598 OR1E3Q8WZA6 343 aa20.96■□□□□ 0.95
CCDC42-203ENST00000581598 CCDC42Q96M95 316 aa20.96■□□□□ 0.95
CCDC42-203ENST00000581598 CCDC3Q9BQI4 270 aa20.96■□□□□ 0.95
CCDC42-203ENST00000581598 FGF22Q9HCT0 170 aa20.96■□□□□ 0.95
CCDC42-203ENST00000581598 ASCL3Q9NQ33 180 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms