RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 THPOP40225 353 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 RASSF2P50749 326 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 F2RL1P55085 397 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 SORDQ00796 357 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 PPATQ06203 517 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 CSTF3Q12996 717 aaKnown RBP4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 OLIG2Q13516 323 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 GPR18Q14330 331 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 DRAP1Q14919 205 aaPredicted RBP4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 TOMM20Q15388 145 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 LEXMQ3ZCV2 418 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 KLHL35Q6PF15 583 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 C9orf47Q6ZRZ4 202 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 TRILQ7L0X0 811 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 ARHGAP12Q8IWW6 846 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 SLC35F3Q8IY50 421 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 MB21D2Q8IYB1 491 aaPredicted RBP4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 HUS1BQ8NHY5 278 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 SNAPC3Q92966 411 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 OTULINQ96BN8 352 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 SYNCQ9H7C4 482 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 RRP7BPQ9NSQ0 103 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 ZBTB40Q9NUA8 1239 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 DLGAP2Q9P1A6 1054 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 VPS28Q9UK41 221 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 ZNF215Q9UL58 517 aaPredicted RBP4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 PROCRQ9UNN8 238 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 SLC45A1Q9Y2W3 748 aa4.83□□□□□ -1.64
SMCHD1-205ENST00000581383 A0A1W2PRG0 241 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 FRMD3A2A2Y4 597 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 BECN2A8MW95 431 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 NKX2-2O95096 273 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 IPO7O95373 1038 aaKnown RBP4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 CYP1A2P05177 515 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 HOXB5P09067 269 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 ALOX12P18054 663 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 MYF6P23409 242 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 ENTPD1P49961 510 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 PMS2P54278 862 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 NIPAL4Q0D2K0 466 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 TRAF1Q13077 416 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 CXorf66Q5JRM2 361 aaPredicted RBP4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 GKAP1Q5VSY0 366 aaPredicted RBP4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 Q6ZSV7 163 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 Q6ZTK2 550 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 ZNF367Q7RTV3 350 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 PATL1Q86TB9 770 aaKnown RBP4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 CCDC13Q8IYE1 715 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 ZBTB2Q8N680 514 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 MIGA1Q8NAN2 632 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 POMGNT1Q8WZA1 660 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 ZKSCAN4Q969J2 545 aaPredicted RBP4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 ERGIC1Q969X5 290 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 ZNF570Q96NI8 536 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 NEUROD6Q96NK8 337 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 ZPBPQ9BS86 351 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 SMARCAD1Q9H4L7 1026 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 SH2D4AQ9H788 454 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 CATSPERBQ9H7T0 1116 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 DDX4Q9NQI0 724 aaKnown RBP4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 CISD1Q9NZ45 108 aaKnown RBP4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 ADD3Q9UEY8 706 aaKnown RBP4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 NFE2L3Q9Y4A8 694 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 LRP12Q9Y561 859 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 RAI2Q9Y5P3 530 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 CEPT1Q9Y6K0 416 aa4.82□□□□□ -1.64
SMCHD1-205ENST00000581383 BTBD18B2RXH4 712 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 MS4A18H0YCH9 400 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 ARSBP15848 533 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 CDH2P19022 906 aaPredicted RBP4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 TBXAS1P24557 533 aaPredicted RBP4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 PIGAP37287 484 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 RFX5P48382 616 aaPredicted RBP4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 ZP1P60852 638 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 MC1RQ01726 317 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 CREB5Q02930 508 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 CUL4AQ13619 759 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 MYBPC2Q14324 1141 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 CRYMQ14894 314 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 C2orf68Q2NKX9 166 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 ZNF284Q2VY69 593 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 RILPL1Q5EBL4 403 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 QSOX2Q6ZRP7 698 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 MON1BQ7L1V2 547 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 SFTPA2Q8IWL1 248 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 BEST2Q8NFU1 509 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 ARRDC2Q8TBH0 407 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 TMEM163Q8TC26 289 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 RSRC1Q96IZ7 334 aaKnown RBP4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 C1orf74Q96LT6 269 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 C1QTNF5Q9BXJ0 243 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 MRPL44Q9H9J2 332 aaKnown RBP4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 RANGRFQ9HD47 186 aaPredicted RBP4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 TMEM51Q9NW97 253 aa4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 SRPRBQ9Y5M8 271 aaKnown RBP4.81□□□□□ -1.64
SMCHD1-205ENST00000581383 RPS10-NUDT3A0A1W2PQS6 291 aa4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 PRR23D1E9PI22 279 aaPredicted RBP4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 ITM2AO43736 263 aa4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 GJB3O75712 270 aa4.8□□□□□ -1.64
SMCHD1-205ENST00000581383 MMP2P08253 660 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms