RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 A2MP01023 1474 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 MBD5Q9P267 1494 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 RTEL1-TNFRSF6BF6WH68 1400 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 VPS8Q8N3P4 1428 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 IGHV4-28A0A0C4DH34 117 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 SNAP23O00161 211 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 TNFSF14O43557 240 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 MTA2O94776 668 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 PRSS2P07478 247 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 NGFRP08138 427 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 T-ENOLP0DO92 83 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 IRF1P10914 325 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 RRM1P23921 792 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 C21orf33P30042 268 aaPredicted RBP4.55□□□□□ -1.68
NF1-220ENST00000581113 MAN1A1P33908 653 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 KRT9P35527 623 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 AMTP48728 403 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 HARS2P49590 506 aaKnown RBP4.55□□□□□ -1.68
NF1-220ENST00000581113 ST3GAL1Q11201 340 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 GRIK3Q13003 919 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 TBX2Q13207 712 aaPredicted RBP4.55□□□□□ -1.68
NF1-220ENST00000581113 HIST2H2ACQ16777 129 aaPredicted RBP4.55□□□□□ -1.68
NF1-220ENST00000581113 TDRD12Q587J7 1177 aaKnown RBP4.55□□□□□ -1.68
NF1-220ENST00000581113 ZNF517Q6ZMY9 492 aaPredicted RBP4.55□□□□□ -1.68
NF1-220ENST00000581113 DHX40Q8IX18 779 aaKnown RBP4.55□□□□□ -1.68
NF1-220ENST00000581113 ZCCHC9Q8N567 271 aaKnown RBP4.55□□□□□ -1.68
NF1-220ENST00000581113 IQCF1Q8N6M8 205 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 TRIB2Q92519 343 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 ERGIC1Q969X5 290 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 THOC3Q96J01 351 aaKnown RBP4.55□□□□□ -1.68
NF1-220ENST00000581113 HIPK2Q9H2X6 1198 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 SMYD2Q9NRG4 433 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 OR6C3Q9NZP0 311 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 TMEM98Q9Y2Y6 226 aa4.55□□□□□ -1.68
NF1-220ENST00000581113 TTC3P53804 2025 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 NCOA2Q15596 1464 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 INO80Q9ULG1 1556 aaPredicted RBP4.54□□□□□ -1.68
NF1-220ENST00000581113 PREX1Q8TCU6 1659 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 NPATQ14207 1427 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 A0A1B0GVM2 712 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 LINC01553A4QN01 128 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 PRSS47A8MTI9 375 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 IFNL4K9M1U5 179 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 LDLRAD4O15165 306 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 TIMM44O43615 452 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 MT-CYBP00156 380 aaPredicted RBP4.54□□□□□ -1.68
NF1-220ENST00000581113 ETFAP13804 333 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 ELF1P32519 619 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 PIGAP37287 484 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 RPL3P39023 403 aaKnown RBP4.54□□□□□ -1.68
NF1-220ENST00000581113 ARL1P40616 181 aaPredicted RBP4.54□□□□□ -1.68
NF1-220ENST00000581113 MXI1P50539 228 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 POU5F1Q01860 360 aaKnown RBP4.54□□□□□ -1.68
NF1-220ENST00000581113 EGR4Q05215 589 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 PLCB4Q15147 1175 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 RNPS1Q15287 305 aaKnown RBP4.54□□□□□ -1.68
NF1-220ENST00000581113 TXNDC8Q6A555 127 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 C8orf82Q6P1X6 216 aaPredicted RBP4.54□□□□□ -1.68
NF1-220ENST00000581113 PDXDC1Q6P996 788 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 R3HCC1LQ7Z5L2 792 aaKnown RBP4.54□□□□□ -1.68
NF1-220ENST00000581113 PCYOX1LQ8NBM8 494 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 CADM4Q8NFZ8 388 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 ELP5Q8TE02 316 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 SAAL1Q96ER3 474 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 H2AFJQ9BTM1 129 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 SEZ6LQ9BYH1 1024 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 USP44Q9H0E7 712 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 BPIFA1Q9NP55 256 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 PCDHB16Q9NRJ7 776 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 CISD1Q9NZ45 108 aaKnown RBP4.54□□□□□ -1.68
NF1-220ENST00000581113 A4GNTQ9UNA3 340 aa4.54□□□□□ -1.68
NF1-220ENST00000581113 DHX29Q7Z478 1369 aaKnown RBP4.54□□□□□ -1.68
NF1-220ENST00000581113 PLXNC1O60486 1568 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 IGKV2D-30A0A075B6S6 120 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 TTC36A6NLP5 189 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 NPIPB11E5RHQ5 1161 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 J3KR12 359 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 J3KRW8 73 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 TCERG1O14776 1098 aaKnown RBP4.53□□□□□ -1.68
NF1-220ENST00000581113 KCNAB3O43448 404 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 KLK8O60259 260 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 SERPINI2O75830 405 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 VNN2O95498 520 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 GLUD1P00367 558 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 TFP02787 698 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 HSP90AA1P07900 732 aaKnown RBP4.53□□□□□ -1.68
NF1-220ENST00000581113 EPHA8P29322 1005 aaPredicted RBP4.53□□□□□ -1.68
NF1-220ENST00000581113 GLUD2P49448 558 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 GNAQP50148 359 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 TCTN1Q2MV58 587 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 SLC46A3Q7Z3Q1 461 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 CNTROBQ8N137 903 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 AADATQ8N5Z0 425 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 NEXN-AS1Q8NBZ9 246 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 SNAPC3Q92966 411 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 FBXL8Q96CD0 374 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 MARK4Q96L34 752 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 GLIS2Q9BZE0 524 aaPredicted RBP4.53□□□□□ -1.68
NF1-220ENST00000581113 MAGEE1Q9HCI5 957 aa4.53□□□□□ -1.68
NF1-220ENST00000581113 IRAK4Q9NWZ3 460 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms