RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 KCTD16Q68DU8 428 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 SPECC1LQ69YQ0 1117 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 LIPIQ6XZB0 460 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 ATG14Q6ZNE5 492 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 NYAP1Q6ZVC0 841 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 DPPA4Q7L190 304 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 PIM3Q86V86 326 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 ZSWIM9Q86XI8 627 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 PAF1Q8N7H5 531 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 TSEN2Q8NCE0 465 aaKnown RBP10.32□□□□□ -0.76
GGA3-210ENST00000580799 SPOCK2Q92563 424 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 MCEEQ96PE7 176 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 TMEM168Q9H0V1 697 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 NUP62CLQ9H1M0 184 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 CYP4F12Q9HCS2 524 aa10.32□□□□□ -0.76
GGA3-210ENST00000580799 HECTD1Q9ULT8 2610 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 A0A1W2PQ67 120 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 PRSS38A1L453 326 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 PYCARD-AS1I3L0S3 204 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 TERTO14746 1132 aaKnown RBP10.31□□□□□ -0.76
GGA3-210ENST00000580799 HGSO14964 777 aaPredicted RBP10.31□□□□□ -0.76
GGA3-210ENST00000580799 EPHB6O15197 1021 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 MYCLP1P12525 358 aaPredicted RBP10.31□□□□□ -0.76
GGA3-210ENST00000580799 ITGB6P18564 788 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 ETV5P41161 510 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 RGRP47804 291 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 KLK7P49862 253 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 PAPOLAP51003 745 aaKnown RBP10.31□□□□□ -0.76
GGA3-210ENST00000580799 MAPK10P53779 464 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 AP1S1P61966 158 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 RPL7AP62424 266 aaKnown RBP10.31□□□□□ -0.76
GGA3-210ENST00000580799 B4GALNT1Q00973 533 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 PEX6Q13608 980 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 NR1D2Q14995 579 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 KRT31Q15323 416 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 PPP1R15BQ5SWA1 713 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 PNCKQ6P2M8 343 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 DCUN1D2Q6PH85 259 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 ZNF438Q7Z4V0 828 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 C17orf82Q86X59 251 aaPredicted RBP10.31□□□□□ -0.76
GGA3-210ENST00000580799 ZFAND4Q86XD8 727 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 NEK11Q8NG66 645 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 ENOX1Q8TC92 643 aaKnown RBP10.31□□□□□ -0.76
GGA3-210ENST00000580799 GPBAR1Q8TDU6 330 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 USP7Q93009 1102 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 CINPQ9BW66 212 aaPredicted RBP10.31□□□□□ -0.76
GGA3-210ENST00000580799 MRPL40Q9NQ50 206 aaKnown RBP10.31□□□□□ -0.76
GGA3-210ENST00000580799 SEPT11Q9NVA2 429 aaKnown RBP10.31□□□□□ -0.76
GGA3-210ENST00000580799 TRNAU1APQ9NX07 287 aaKnown RBP10.31□□□□□ -0.76
GGA3-210ENST00000580799 FOXJ2Q9P0K8 574 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 AP4E1Q9UPM8 1137 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 SIK3Q9Y2K2 1263 aa10.31□□□□□ -0.76
GGA3-210ENST00000580799 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.3□□□□□ -0.76
GGA3-210ENST00000580799 C9orf172C9J069 976 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 STMND1H3BQB6 276 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 EEF2KO00418 725 aaKnown RBP10.3□□□□□ -0.76
GGA3-210ENST00000580799 TRAFD1O14545 582 aaPredicted RBP10.3□□□□□ -0.76
GGA3-210ENST00000580799 DAPK3O43293 454 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 SUV39H1O43463 412 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 PPFIA2O75334 1257 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 PRKCGP05129 697 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 FAM87AP0C7U9 286 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 CCDC172P0C7W6 258 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 KRT10P13645 584 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 CCNB1P14635 433 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 NFKBIAP25963 317 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 GPR3P46089 330 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 RENBPP51606 427 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 ZNF135P52742 658 aaPredicted RBP10.3□□□□□ -0.76
GGA3-210ENST00000580799 IL10RBQ08334 325 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 ILF3Q12906 894 aaKnown RBP eCLIP10.3□□□□□ -0.76
GGA3-210ENST00000580799 TRA2AQ13595 282 aaKnown RBP eCLIP10.3□□□□□ -0.763e-7■■■■□ 23.2
GGA3-210ENST00000580799 C16orf72Q14CZ0 275 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 ACOX1Q15067 660 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 TBR1Q16650 682 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 PPP1R2P3Q6NXS1 205 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 TMPRSS9Q7Z410 1059 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 VASH2Q86V25 355 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 CCDC112Q8NEF3 446 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 CELF6Q96J87 481 aaKnown RBP10.3□□□□□ -0.76
GGA3-210ENST00000580799 PSKH2Q96QS6 385 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 AGPAT1Q99943 283 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 LGR4Q9BXB1 951 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 GSDMCQ9BYG8 508 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 SLC39A8Q9C0K1 460 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 ADNPQ9H2P0 1102 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 SEMA6CQ9H3T2 930 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 DHX35Q9H5Z1 703 aaKnown RBP10.3□□□□□ -0.76
GGA3-210ENST00000580799 SP110Q9HB58 689 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 RDH14Q9HBH5 336 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 PHPT1Q9NRX4 125 aaPredicted RBP10.3□□□□□ -0.76
GGA3-210ENST00000580799 MOSPD1Q9UJG1 213 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 PCDHGA3Q9Y5H0 932 aa10.3□□□□□ -0.76
GGA3-210ENST00000580799 BOD1L1Q8NFC6 3051 aa10.29□□□□□ -0.76
GGA3-210ENST00000580799 RHPN2P1A8MT19 583 aa10.29□□□□□ -0.76
GGA3-210ENST00000580799 TEX33O43247 280 aa10.29□□□□□ -0.76
GGA3-210ENST00000580799 B4GAT1O43505 415 aa10.29□□□□□ -0.76
GGA3-210ENST00000580799 SOCS5O75159 536 aa10.29□□□□□ -0.76
GGA3-210ENST00000580799 GM2AP17900 193 aa10.29□□□□□ -0.76
GGA3-210ENST00000580799 ALDH4A1P30038 563 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms