RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 LEKR1Q6ZMV7 388 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 RAB11FIP2Q7L804 512 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 FAM72BQ86X60 149 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 UMODL1-AS1Q8N2C9 162 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 ARFGAP1Q8N6T3 406 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 KIAA1524Q8TCG1 905 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 ZNF653Q96CK0 615 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 PRR11Q96HE9 360 aaPredicted RBP13.46□□□□□ -0.25
TRAF4-214ENST00000580073 MCEEQ96PE7 176 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 APOOQ9BUR5 198 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 SUV39H2Q9H5I1 410 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 ZNHIT6Q9NWK9 470 aaKnown RBP13.46□□□□□ -0.25
TRAF4-214ENST00000580073 KCTD5Q9NXV2 234 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 MYO1AQ9UBC5 1043 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 TFR2Q9UP52 801 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 ATP8A1Q9Y2Q0 1164 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 HEMK1Q9Y5R4 338 aaPredicted RBP13.46□□□□□ -0.25
TRAF4-214ENST00000580073 DGKBQ9Y6T7 804 aa13.46□□□□□ -0.25
TRAF4-214ENST00000580073 TMEM191CA6NGB0 347 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 ARHGAP42A6NI28 874 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 PDE2AO00408 941 aaPredicted RBP13.45□□□□□ -0.26
TRAF4-214ENST00000580073 CCP110O43303 1012 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 PIGNO95427 931 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 PCCBP05166 539 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 CYP1A2P05177 515 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 SFTPCP11686 197 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 TIMP2P16035 220 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 GLB1P16278 677 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 CD82P27701 267 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 NDST2P52849 883 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 POLR2LP62875 67 aaKnown RBP13.45□□□□□ -0.26
TRAF4-214ENST00000580073 CPNE8Q86YQ8 564 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 CCNJLQ8IV13 435 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 ZSCAN1Q8NBB4 408 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 RBM15Q96T37 977 aaKnown RBP eCLIP13.45□□□□□ -0.267e-8■□□□□ 9.4
TRAF4-214ENST00000580073 ARHGAP9Q9BRR9 750 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 CINPQ9BW66 212 aaPredicted RBP13.45□□□□□ -0.26
TRAF4-214ENST00000580073 CLPBQ9H078 707 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 LRRN3Q9H3W5 708 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 PCDH12Q9NPG4 1184 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 MBNL1Q9NR56 388 aaKnown RBP13.45□□□□□ -0.26
TRAF4-214ENST00000580073 WDR70Q9NW82 654 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 IMPACTQ9P2X3 320 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 LHX3Q9UBR4 397 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 REXO2Q9Y3B8 237 aaKnown RBP13.45□□□□□ -0.26
TRAF4-214ENST00000580073 ZNF462Q96JM2 2506 aa13.45□□□□□ -0.26
TRAF4-214ENST00000580073 A0A1W2PQ67 120 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 TNFRSF10CO14798 259 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 SLC28A2O43868 658 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 AKR1B10O60218 316 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 LCA5LO95447 670 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 ITGB2P05107 769 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 ELFN1P0C7U0 828 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 SLC5A2P31639 672 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 UGT1A5P35504 534 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 CSNK1DP48730 415 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 ZNF135P52742 658 aaPredicted RBP13.44□□□□□ -0.26
TRAF4-214ENST00000580073 LY6DQ14210 128 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 INPP5AQ14642 412 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 RFTN1Q14699 578 aaPredicted RBP13.44□□□□□ -0.26
TRAF4-214ENST00000580073 WSCD2Q2TBF2 565 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 DCUN1D2Q6PH85 259 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 USP53Q70EK8 1073 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 RD3Q7Z3Z2 195 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 OR56A4Q8NGH8 313 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 BTBD6Q96KE9 485 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 EXOC2Q96KP1 924 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 CCDC42Q96M95 316 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 CMKLR1Q99788 373 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 CNPY3Q9BT09 278 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 FAM117AQ9C073 453 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 CLMPQ9H6B4 373 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 SP110Q9HB58 689 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 APPL1Q9UKG1 709 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 FZD10Q9ULW2 581 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 COQ6Q9Y2Z9 468 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 PCDHB11Q9Y5F2 797 aa13.44□□□□□ -0.26
TRAF4-214ENST00000580073 ASH1LQ9NR48 2969 aaKnown RBP13.43□□□□□ -0.26
TRAF4-214ENST00000580073 A0A0U1RQJ8 604 aa13.43□□□□□ -0.26
TRAF4-214ENST00000580073 A0A1W2PNU3 283 aaPredicted RBP13.43□□□□□ -0.26
TRAF4-214ENST00000580073 RCCD1A6NED2 376 aa13.43□□□□□ -0.26
TRAF4-214ENST00000580073 NVLO15381 856 aaKnown RBP13.43□□□□□ -0.26
TRAF4-214ENST00000580073 ZIC2O95409 532 aaPredicted RBP13.43□□□□□ -0.26
TRAF4-214ENST00000580073 LIG3P49916 1009 aa13.43□□□□□ -0.26
TRAF4-214ENST00000580073 BCL2L1Q07817 233 aa13.43□□□□□ -0.26
TRAF4-214ENST00000580073 ARHGEF7Q14155 803 aa13.43□□□□□ -0.26
TRAF4-214ENST00000580073 CLPPQ16740 277 aaPredicted RBP13.43□□□□□ -0.26
TRAF4-214ENST00000580073 MAP9Q49MG5 647 aa13.43□□□□□ -0.26
TRAF4-214ENST00000580073 CERCAMQ5T4B2 595 aa13.43□□□□□ -0.26
TRAF4-214ENST00000580073 TMEM164Q5U3C3 297 aa13.43□□□□□ -0.26
TRAF4-214ENST00000580073 KIAA1614Q5VZ46 1190 aa13.43□□□□□ -0.26
TRAF4-214ENST00000580073 TAF8Q7Z7C8 310 aa13.43□□□□□ -0.26
TRAF4-214ENST00000580073 GPR156Q8NFN8 814 aa13.43□□□□□ -0.26
TRAF4-214ENST00000580073 TSACCQ96A04 125 aaPredicted RBP13.43□□□□□ -0.26
TRAF4-214ENST00000580073 SGF29Q96ES7 293 aa13.43□□□□□ -0.26
TRAF4-214ENST00000580073 PDXPQ96GD0 296 aa13.43□□□□□ -0.26
TRAF4-214ENST00000580073 B3GNT4Q9C0J1 378 aa13.43□□□□□ -0.26
TRAF4-214ENST00000580073 NOL6Q9H6R4 1146 aaKnown RBP13.43□□□□□ -0.26
TRAF4-214ENST00000580073 WDR26Q9H7D7 661 aa13.43□□□□□ -0.26
TRAF4-214ENST00000580073 CAAP1Q9H8G2 361 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms