RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 SLC7A4O43246 635 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 CDH16O75309 829 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 SHBGP04278 402 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 CTSLP07711 333 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 CYP2A6P11509 494 aaPredicted RBP13.46□□□□□ -0.25
SRSF1-202ENST00000578430 NMBRP28336 390 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 SLC8A1P32418 973 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 TIE1P35590 1138 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 HADHAP40939 763 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 ZNF844Q08AG5 666 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 ILF2Q12905 390 aaKnown RBP13.46□□□□□ -0.25
SRSF1-202ENST00000578430 UGP2Q16851 508 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 CEP85LQ5SZL2 805 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 UBAP2Q5T6F2 1119 aaKnown RBP13.46□□□□□ -0.25
SRSF1-202ENST00000578430 LRRC6Q86X45 466 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 UBALD2Q8IYN6 164 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 SYNPOQ8N3V7 929 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 TTC30BQ8N4P2 665 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 ZNF366Q8N895 744 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 UHMK1Q8TAS1 419 aaKnown RBP13.46□□□□□ -0.25
SRSF1-202ENST00000578430 PIP4K2CQ8TBX8 421 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 MFSD3Q96ES6 412 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 FCRL3Q96P31 734 aaPredicted RBP13.46□□□□□ -0.25
SRSF1-202ENST00000578430 ACOX2Q99424 681 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 SH3GL2Q99962 352 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 RSPH9Q9H1X1 276 aaPredicted RBP13.46□□□□□ -0.25
SRSF1-202ENST00000578430 MTG2Q9H4K7 406 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 MED4Q9NPJ6 270 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 DYRK4Q9NR20 520 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 NLE1Q9NVX2 485 aaPredicted RBP13.46□□□□□ -0.25
SRSF1-202ENST00000578430 VPS18Q9P253 973 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 ZNF711Q9Y462 761 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 SPO11Q9Y5K1 396 aa13.46□□□□□ -0.25
SRSF1-202ENST00000578430 AGPSO00116 658 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 KPNA3O00505 521 aaPredicted RBP13.45□□□□□ -0.26
SRSF1-202ENST00000578430 ADH1BP00325 375 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 C1QAP02745 245 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 MYZAPP0CAP1 466 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 C7P10643 843 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 ZNF30P17039 623 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 XPAP23025 273 aaPredicted RBP13.45□□□□□ -0.26
SRSF1-202ENST00000578430 HNF1BP35680 557 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 HMGCLP35914 325 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 ABL2P42684 1182 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 ZNF140P52738 457 aaPredicted RBP13.45□□□□□ -0.26
SRSF1-202ENST00000578430 PTPN5P54829 565 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 SEC13P55735 322 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 FAM193AP78312 1265 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 CCDC15Q0P6D6 951 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 CCINQ13939 588 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 CNGA3Q16281 694 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 KRT71Q3SY84 523 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 KBTBD12Q3ZCT8 623 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 HSP90B2PQ58FF3 399 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 EOGTQ5NDL2 527 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 ESRP1Q6NXG1 681 aaKnown RBP13.45□□□□□ -0.26
SRSF1-202ENST00000578430 ERAP2Q6P179 960 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 CES3Q6UWW8 571 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 MARK2Q7KZI7 788 aaKnown RBP13.45□□□□□ -0.26
SRSF1-202ENST00000578430 ZSWIM9Q86XI8 627 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 RAVER1Q8IY67 606 aaKnown RBP13.45□□□□□ -0.26
SRSF1-202ENST00000578430 IL17RCQ8NAC3 791 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 MDGA1Q8NFP4 955 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 OR2W6PQ8NHA6 318 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 CALML6Q8TD86 181 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 SLC44A1Q8WWI5 657 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 SCG3Q8WXD2 468 aaKnown RBP13.45□□□□□ -0.26
SRSF1-202ENST00000578430 RAB7BQ96AH8 199 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 SGSM3Q96HU1 749 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 ZNF778Q96MU6 729 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 NELL2Q99435 816 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 FAM167BQ9BTA0 163 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 HDAC8Q9BY41 377 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 GPR63Q9BZJ6 419 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 STMN4Q9H169 189 aaPredicted RBP13.45□□□□□ -0.26
SRSF1-202ENST00000578430 ZFYVE1Q9HBF4 777 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 ARHGEF3Q9NR81 526 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 C20orf96Q9NUD7 363 aaPredicted RBP13.45□□□□□ -0.26
SRSF1-202ENST00000578430 ZNF180Q9UJW8 692 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 PKP3Q9Y446 797 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 IKBKGQ9Y6K9 419 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 F5P12259 2224 aa13.45□□□□□ -0.26
SRSF1-202ENST00000578430 SHISA7A6NL88 538 aa13.44□□□□□ -0.26
SRSF1-202ENST00000578430 C16orf96A6NNT2 1141 aa13.44□□□□□ -0.26
SRSF1-202ENST00000578430 H7C0S8 307 aa13.44□□□□□ -0.26
SRSF1-202ENST00000578430 STX7O15400 261 aaKnown RBP13.44□□□□□ -0.26
SRSF1-202ENST00000578430 GPR37L1O60883 481 aa13.44□□□□□ -0.26
SRSF1-202ENST00000578430 RPP40O75818 363 aaKnown RBP13.44□□□□□ -0.26
SRSF1-202ENST00000578430 KLF8O95600 359 aaPredicted RBP13.44□□□□□ -0.26
SRSF1-202ENST00000578430 IL1BP01584 269 aa13.44□□□□□ -0.26
SRSF1-202ENST00000578430 INHBAP08476 426 aa13.44□□□□□ -0.26
SRSF1-202ENST00000578430 PIRTP0C851 137 aa13.44□□□□□ -0.26
SRSF1-202ENST00000578430 TIMP2P16035 220 aa13.44□□□□□ -0.26
SRSF1-202ENST00000578430 CTPS1P17812 591 aa13.44□□□□□ -0.26
SRSF1-202ENST00000578430 ATP5DP30049 168 aa13.44□□□□□ -0.26
SRSF1-202ENST00000578430 VIPR1P32241 457 aa13.44□□□□□ -0.26
SRSF1-202ENST00000578430 MSH2P43246 934 aa13.44□□□□□ -0.26
SRSF1-202ENST00000578430 ARCN1P48444 511 aaKnown RBP13.44□□□□□ -0.26
SRSF1-202ENST00000578430 PRAMEP78395 509 aa13.44□□□□□ -0.26
SRSF1-202ENST00000578430 ELP6Q0PNE2 266 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms