RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 ADI1Q9BV57 179 aa17.93■□□□□ 0.46
ATPAF1-214ENST00000576409 CACNA2D2Q9NY47 1150 aa17.93■□□□□ 0.46
ATPAF1-214ENST00000576409 LEF1Q9UJU2 399 aaPredicted RBP17.93■□□□□ 0.46
ATPAF1-214ENST00000576409 SLC27A5Q9Y2P5 690 aa17.93■□□□□ 0.46
ATPAF1-214ENST00000576409 F8W810 466 aa17.93■□□□□ 0.46
ATPAF1-214ENST00000576409 UBXN8O00124 270 aa17.93■□□□□ 0.46
ATPAF1-214ENST00000576409 ARIH2O95376 493 aa17.93■□□□□ 0.46
ATPAF1-214ENST00000576409 GRM5P41594 1212 aa17.93■□□□□ 0.46
ATPAF1-214ENST00000576409 CPT1AP50416 773 aa17.93■□□□□ 0.46
ATPAF1-214ENST00000576409 HSPA14Q0VDF9 509 aa17.93■□□□□ 0.46
ATPAF1-214ENST00000576409 MFSD10Q14728 455 aa17.93■□□□□ 0.46
ATPAF1-214ENST00000576409 TTC23Q5W5X9 447 aa17.93■□□□□ 0.46
ATPAF1-214ENST00000576409 POTEHQ6S545 545 aa17.93■□□□□ 0.46
ATPAF1-214ENST00000576409 ZNF554Q86TJ5 538 aa17.93■□□□□ 0.46
ATPAF1-214ENST00000576409 ZNF410Q86VK4 478 aa17.93■□□□□ 0.46
ATPAF1-214ENST00000576409 HPS1Q92902 700 aa17.93■□□□□ 0.46
ATPAF1-214ENST00000576409 CYP2S1Q96SQ9 504 aa17.93■□□□□ 0.46
ATPAF1-214ENST00000576409 POLR1EQ9GZS1 481 aaKnown RBP17.93■□□□□ 0.46
ATPAF1-214ENST00000576409 SLC8A2Q9UPR5 921 aa17.93■□□□□ 0.46
ATPAF1-214ENST00000576409 A0A088AWK7 358 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 C9IYK1 514 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 AQP1P29972 269 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 GJA9P57773 515 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 DSC2Q02487 901 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 TNK2Q07912 1038 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 TTLL9Q3SXZ7 439 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 ARMC4Q5T2S8 1044 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 NCBP2-AS2Q69YL0 99 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 TRIM74Q86UV6 250 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 TRIM73Q86UV7 250 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 ZNF540Q8NDQ6 660 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 OR6K2Q8NGY2 324 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 GPBP1L1Q9HC44 474 aaPredicted RBP17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 MAP1BP46821 2468 aaKnown RBP17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 STAU1O95793 577 aaKnown RBP17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 NNMTP40261 264 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 LIPEQ05469 1076 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 STXBP5Q5T5C0 1151 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 TP53INP2Q8IXH6 220 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 SH3GL1Q99961 368 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 ABHD16BQ9H3Z7 469 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 SOX17Q9H6I2 414 aaPredicted RBP17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 MYH1P12882 1939 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 MYH4Q9Y623 1939 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 GPR182O15218 404 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 DLX3O60479 287 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 SNAP91O60641 907 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 FTH1P02794 183 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 FGF3P11487 239 aaPredicted RBP17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 GNA12Q03113 381 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 FAM171A1Q5VUB5 890 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 LBX2Q6XYB7 198 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 CNTD1Q8N815 330 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 SERPINB11Q96P15 392 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 FANCEQ9HB96 536 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 USP29Q9HBJ7 922 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 ZC4H2Q9NQZ6 224 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 PIGVQ9NUD9 493 aa17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.92■□□□□ 0.46
ATPAF1-214ENST00000576409 MGAT4DA6NG13 374 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 CNOT3O75175 753 aaKnown RBP17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 PSMD5Q16401 504 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 RELL1Q8IUW5 271 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 LRRC52Q8N7C0 313 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 RDH11Q8TC12 318 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 TWIST2Q8WVJ9 160 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 SLC2A6Q9UGQ3 507 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 LAMA4Q16363 1823 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 TSPAN1O60635 241 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 SLC22A3O75751 556 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 ITGALP20701 1170 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 IFNA8P32881 189 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 PTPN9P43378 593 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 MFSD14CQ5VZR4 134 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 MAGED4Q96JG8 741 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 RGPD5Q99666 1765 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 ADAM2Q99965 735 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 RHOBTB2Q9BYZ6 727 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 RMND5AQ9H871 391 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 OAZ3Q9UMX2 235 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 DGUOKQ16854 277 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 TSSK3Q96PN8 268 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 PARK7Q99497 189 aaKnown RBP17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 ROBO1Q9Y6N7 1651 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 MYO10Q9HD67 2058 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 KLF11O14901 512 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 PIP5K1BO14986 540 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 CD3EAPO15446 510 aaKnown RBP17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 KCNH1O95259 989 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 KRT6AP02538 564 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 AHSGP02765 367 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 KRT6BP04259 564 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 CKMP06732 381 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 PRKCHP24723 683 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 TTKP33981 857 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 KRT6CP48668 564 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 TLR1Q15399 786 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 DPYSL2Q16555 572 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 ATG14Q6ZNE5 492 aa17.91■□□□□ 0.46
ATPAF1-214ENST00000576409 TERB1Q8NA31 727 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms