RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 MCCC1Q96RQ3 725 aaPredicted RBP24.11■■□□□ 1.45
ATPAF1-213ENST00000574428 LTB4R2Q9NPC1 389 aa24.11■■□□□ 1.45
ATPAF1-213ENST00000574428 TREX1Q9NSU2 369 aa24.11■■□□□ 1.45
ATPAF1-213ENST00000574428 HACD3Q9P035 362 aa24.11■■□□□ 1.45
ATPAF1-213ENST00000574428 MRPS17Q9Y2R5 130 aaKnown RBP24.11■■□□□ 1.45
ATPAF1-213ENST00000574428 PPIL1Q9Y3C6 166 aa24.11■■□□□ 1.45
ATPAF1-213ENST00000574428 KANSL1LA0AUZ9 987 aa24.1■■□□□ 1.45
ATPAF1-213ENST00000574428 CCL22O00626 93 aa24.1■■□□□ 1.45
ATPAF1-213ENST00000574428 RNASEH1O60930 286 aaKnown RBP24.1■■□□□ 1.45
ATPAF1-213ENST00000574428 GSTA2P09210 222 aa24.1■■□□□ 1.45
ATPAF1-213ENST00000574428 COPAP53621 1224 aa24.1■■□□□ 1.45
ATPAF1-213ENST00000574428 EFTUD2Q15029 972 aaKnown RBP eCLIP24.1■■□□□ 1.453e-6■■■■■ 41.9
ATPAF1-213ENST00000574428 CNGA3Q16281 694 aa24.1■■□□□ 1.45
ATPAF1-213ENST00000574428 MICALCLQ6ZW33 695 aa24.1■■□□□ 1.45
ATPAF1-213ENST00000574428 TTC7BQ86TV6 843 aa24.1■■□□□ 1.45
ATPAF1-213ENST00000574428 TSPAN33Q86UF1 283 aa24.1■■□□□ 1.45
ATPAF1-213ENST00000574428 TTC30BQ8N4P2 665 aa24.1■■□□□ 1.45
ATPAF1-213ENST00000574428 PPP1R16AQ96I34 528 aa24.1■■□□□ 1.45
ATPAF1-213ENST00000574428 GPR63Q9BZJ6 419 aa24.1■■□□□ 1.45
ATPAF1-213ENST00000574428 LMAN1LQ9HAT1 526 aa24.1■■□□□ 1.45
ATPAF1-213ENST00000574428 PCDH12Q9NPG4 1184 aa24.1■■□□□ 1.45
ATPAF1-213ENST00000574428 RABGEF1Q9UJ41 708 aa24.1■■□□□ 1.45
ATPAF1-213ENST00000574428 FAM169AQ9Y6X4 670 aa24.1■■□□□ 1.45
ATPAF1-213ENST00000574428 C1orf232A0A0U1RR37 186 aa24.09■■□□□ 1.45
ATPAF1-213ENST00000574428 XPAP23025 273 aaPredicted RBP24.09■■□□□ 1.45
ATPAF1-213ENST00000574428 TMPRSS15P98073 1019 aa24.09■■□□□ 1.45
ATPAF1-213ENST00000574428 CST6Q15828 149 aa24.09■■□□□ 1.45
ATPAF1-213ENST00000574428 EOGTQ5NDL2 527 aa24.09■■□□□ 1.45
ATPAF1-213ENST00000574428 ARMC3Q5W041 872 aa24.09■■□□□ 1.45
ATPAF1-213ENST00000574428 NLRP9Q7RTR0 991 aa24.09■■□□□ 1.45
ATPAF1-213ENST00000574428 OR13C4Q8NGS5 318 aa24.09■■□□□ 1.45
ATPAF1-213ENST00000574428 OR13J1Q8NGT2 312 aa24.09■■□□□ 1.45
ATPAF1-213ENST00000574428 DNAJC1Q96KC8 554 aaKnown RBP24.09■■□□□ 1.45
ATPAF1-213ENST00000574428 MKRN2Q9H000 416 aaKnown RBP24.09■■□□□ 1.45
ATPAF1-213ENST00000574428 SLC6A17Q9H1V8 727 aa24.09■■□□□ 1.45
ATPAF1-213ENST00000574428 CD248Q9HCU0 757 aa24.09■■□□□ 1.45
ATPAF1-213ENST00000574428 DYRK4Q9NR20 520 aa24.09■■□□□ 1.45
ATPAF1-213ENST00000574428 B4GALT6Q9UBX8 382 aa24.09■■□□□ 1.45
ATPAF1-213ENST00000574428 NFS1Q9Y697 457 aa24.09■■□□□ 1.45
ATPAF1-213ENST00000574428 C2orf81A6NN90 581 aa24.08■■□□□ 1.45
ATPAF1-213ENST00000574428 MID1O15344 667 aa24.08■■□□□ 1.45
ATPAF1-213ENST00000574428 STX2P32856 288 aa24.08■■□□□ 1.45
ATPAF1-213ENST00000574428 ZNF140P52738 457 aaPredicted RBP24.08■■□□□ 1.45
ATPAF1-213ENST00000574428 LAMB3Q13751 1172 aa24.08■■□□□ 1.45
ATPAF1-213ENST00000574428 LRRC32Q14392 662 aa24.08■■□□□ 1.45
ATPAF1-213ENST00000574428 CDKN3Q16667 212 aa24.08■■□□□ 1.45
ATPAF1-213ENST00000574428 HSF5Q4G112 596 aaPredicted RBP24.08■■□□□ 1.45
ATPAF1-213ENST00000574428 FAM46CQ5VWP2 391 aa24.08■■□□□ 1.45
ATPAF1-213ENST00000574428 ZNF776Q68DI1 518 aaPredicted RBP24.08■■□□□ 1.45
ATPAF1-213ENST00000574428 CRTC1Q6UUV9 634 aa24.08■■□□□ 1.45
ATPAF1-213ENST00000574428 EID2BQ96D98 161 aa24.08■■□□□ 1.45
ATPAF1-213ENST00000574428 LYSMD1Q96S90 227 aa24.08■■□□□ 1.45
ATPAF1-213ENST00000574428 TRABDQ9H4I3 376 aa24.08■■□□□ 1.45
ATPAF1-213ENST00000574428 PPANQ9NQ55 473 aaKnown RBP24.08■■□□□ 1.45
ATPAF1-213ENST00000574428 MMP17Q9ULZ9 603 aa24.08■■□□□ 1.45
ATPAF1-213ENST00000574428 FAM170BA6NMN3 283 aa24.08■■□□□ 1.44
ATPAF1-213ENST00000574428 PAPSS2O95340 614 aaPredicted RBP24.08■■□□□ 1.44
ATPAF1-213ENST00000574428 CLDN7O95471 211 aa24.08■■□□□ 1.44
ATPAF1-213ENST00000574428 LHCGRP22888 699 aa24.08■■□□□ 1.44
ATPAF1-213ENST00000574428 RPS14P62263 151 aaKnown RBP24.08■■□□□ 1.44
ATPAF1-213ENST00000574428 IFFO1Q0D2I5 559 aa24.08■■□□□ 1.44
ATPAF1-213ENST00000574428 ALS2CLQ60I27 953 aa24.08■■□□□ 1.44
ATPAF1-213ENST00000574428 FBXL19Q6PCT2 694 aa24.08■■□□□ 1.44
ATPAF1-213ENST00000574428 TMEM92Q6UXU6 159 aa24.08■■□□□ 1.44
ATPAF1-213ENST00000574428 OR4K2Q8NGD2 314 aa24.08■■□□□ 1.44
ATPAF1-213ENST00000574428 CERS2Q96G23 380 aa24.08■■□□□ 1.44
ATPAF1-213ENST00000574428 ACSS3Q9H6R3 686 aa24.08■■□□□ 1.44
ATPAF1-213ENST00000574428 TBC1D17Q9HA65 648 aa24.08■■□□□ 1.44
ATPAF1-213ENST00000574428 ZFYVE1Q9HBF4 777 aa24.08■■□□□ 1.44
ATPAF1-213ENST00000574428 MOCS1Q9NZB8 636 aa24.08■■□□□ 1.44
ATPAF1-213ENST00000574428 ITM2BQ9Y287 266 aa24.08■■□□□ 1.44
ATPAF1-213ENST00000574428 AGPSO00116 658 aa24.07■■□□□ 1.44
ATPAF1-213ENST00000574428 ALDH1A2O94788 518 aa24.07■■□□□ 1.44
ATPAF1-213ENST00000574428 VAPBO95292 243 aa24.07■■□□□ 1.44
ATPAF1-213ENST00000574428 ERVK-10P10266 1014 aa24.07■■□□□ 1.44
ATPAF1-213ENST00000574428 LPOP22079 712 aaPredicted RBP24.07■■□□□ 1.44
ATPAF1-213ENST00000574428 ARSDP51689 593 aa24.07■■□□□ 1.44
ATPAF1-213ENST00000574428 FZD5Q13467 585 aa24.07■■□□□ 1.44
ATPAF1-213ENST00000574428 KBTBD12Q3ZCT8 623 aa24.07■■□□□ 1.44
ATPAF1-213ENST00000574428 LRRC66Q68CR7 880 aa24.07■■□□□ 1.44
ATPAF1-213ENST00000574428 AADATQ8N5Z0 425 aa24.07■■□□□ 1.44
ATPAF1-213ENST00000574428 FLCNQ8NFG4 579 aa24.07■■□□□ 1.44
ATPAF1-213ENST00000574428 SRPK1Q96SB4 655 aaKnown RBP24.07■■□□□ 1.44
ATPAF1-213ENST00000574428 BPIFA1Q9NP55 256 aa24.07■■□□□ 1.44
ATPAF1-213ENST00000574428 C20orf96Q9NUD7 363 aaPredicted RBP24.07■■□□□ 1.44
ATPAF1-213ENST00000574428 GOLGA8KD6RF30 607 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 GOLGA8TH3BQL2 631 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 ADH1BP00325 375 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 C1QAP02745 245 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 ADRB3P13945 408 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 ARNTP27540 789 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 ZNF844Q08AG5 666 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 CNTN1Q12860 1018 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 LONRF1Q17RB8 773 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 SKIDA1Q1XH10 827 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 ERN2Q76MJ5 926 aaKnown RBP24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 STYXQ8WUJ0 223 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 MRRFQ96E11 262 aaKnown RBP24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 FBRSQ9HAH7 460 aa24.06■■□□□ 1.44
ATPAF1-213ENST00000574428 SMYD2Q9NRG4 433 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms