RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 NLE1Q9NVX2 485 aaPredicted RBP16.33■□□□□ 0.21
POLR2A-201ENST00000572844 PLXNA4Q9HCM2 1894 aa16.33■□□□□ 0.2
POLR2A-201ENST00000572844 COCHO43405 550 aa16.33■□□□□ 0.2
POLR2A-201ENST00000572844 ABLIM3O94929 683 aa16.33■□□□□ 0.2
POLR2A-201ENST00000572844 PPP3CCP48454 512 aa16.33■□□□□ 0.2
POLR2A-201ENST00000572844 SULT2A1Q06520 285 aa16.33■□□□□ 0.2
POLR2A-201ENST00000572844 CYLC2Q14093 348 aaPredicted RBP16.33■□□□□ 0.2
POLR2A-201ENST00000572844 IL31Q6EBC2 164 aa16.33■□□□□ 0.2
POLR2A-201ENST00000572844 ISCA2Q86U28 154 aa16.33■□□□□ 0.2
POLR2A-201ENST00000572844 KYQ8NBH2 561 aa16.33■□□□□ 0.2
POLR2A-201ENST00000572844 DDX50Q9BQ39 737 aaKnown RBP16.33■□□□□ 0.2
POLR2A-201ENST00000572844 OSBPL1AQ9BXW6 950 aa16.33■□□□□ 0.2
POLR2A-201ENST00000572844 ZBTB26Q9HCK0 441 aa16.33■□□□□ 0.2
POLR2A-201ENST00000572844 ACSS2Q9NR19 701 aa16.33■□□□□ 0.2
POLR2A-201ENST00000572844 CATSPERZQ9NTU4 200 aa16.33■□□□□ 0.2
POLR2A-201ENST00000572844 TRPM5Q9NZQ8 1165 aa16.33■□□□□ 0.2
POLR2A-201ENST00000572844 TBC1D30Q9Y2I9 924 aa16.33■□□□□ 0.2
POLR2A-201ENST00000572844 ARL5AQ9Y689 179 aa16.33■□□□□ 0.2
POLR2A-201ENST00000572844 WASF2Q9Y6W5 498 aa16.33■□□□□ 0.2
POLR2A-201ENST00000572844 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.32■□□□□ 0.2
POLR2A-201ENST00000572844 A0A1B0GVM2 712 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 TCAF2A6NFQ2 919 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 NEMP2A6NFY4 417 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 INSIG1O15503 277 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 MAP3K7O43318 606 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 FKTNO75072 461 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 GJB3O75712 270 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 STC2O76061 302 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 KCNA5P22460 613 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 STC1P52823 247 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 INHBCP55103 352 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 ZNF177Q13360 481 aaPredicted RBP16.32■□□□□ 0.2
POLR2A-201ENST00000572844 GALNT3Q14435 633 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 ZNF549Q6P9A3 640 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 ZNF783Q6ZMS7 281 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 CHSY3Q70JA7 882 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 DENND1CQ8IV53 801 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 PELI3Q8N2H9 469 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 OR52K2Q8NGK3 314 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 ZNF461Q8TAF7 563 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 CDKN2AIPNLQ96HQ2 116 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 IGSF21Q96ID5 467 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 VN1R3Q9BXE9 311 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 SHCBP1LQ9BZQ2 653 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 UNKQ9C0B0 810 aaKnown RBP16.32■□□□□ 0.2
POLR2A-201ENST00000572844 MEAF6Q9HAF1 191 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 POMPQ9Y244 141 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 LRCH1Q9Y2L9 728 aa16.32■□□□□ 0.2
POLR2A-201ENST00000572844 OR51F1A6NGY5 319 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 CCL22O00626 93 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 KLKB1P03952 638 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 JUNP05412 331 aaKnown RBP16.31■□□□□ 0.2
POLR2A-201ENST00000572844 RHOCP08134 193 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 HSPA1AP0DMV8 641 aaKnown RBP16.31■□□□□ 0.2
POLR2A-201ENST00000572844 HSPA1BP0DMV9 641 aaKnown RBP16.31■□□□□ 0.2
POLR2A-201ENST00000572844 ZNF140P52738 457 aaPredicted RBP16.31■□□□□ 0.2
POLR2A-201ENST00000572844 RPS24P62847 133 aaKnown RBP16.31■□□□□ 0.2
POLR2A-201ENST00000572844 BLMHQ13867 455 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 TAF1AQ15573 450 aaPredicted RBP16.31■□□□□ 0.2
POLR2A-201ENST00000572844 PDCD2Q16342 344 aaPredicted RBP16.31■□□□□ 0.2
POLR2A-201ENST00000572844 ADGRF1Q5T601 910 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 GPR158Q5T848 1215 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 LDB1Q86U70 411 aaPredicted RBP16.31■□□□□ 0.2
POLR2A-201ENST00000572844 SNX32Q86XE0 403 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 RNF135Q8IUD6 432 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 RHEBL1Q8TAI7 183 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 ASB2Q96Q27 587 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 TCF12Q99081 682 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 SERPINI1Q99574 410 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 CLSTN3Q9BQT9 956 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 KLF16Q9BXK1 252 aaPredicted RBP16.31■□□□□ 0.2
POLR2A-201ENST00000572844 SUDS3Q9H7L9 328 aaPredicted RBP16.31■□□□□ 0.2
POLR2A-201ENST00000572844 GTSE1Q9NYZ3 720 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 STOML2Q9UJZ1 356 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 SEC24AO95486 1093 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 LATS1O95835 1130 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 CD1DP15813 335 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 CORO1AP31146 461 aaKnown RBP16.31■□□□□ 0.2
POLR2A-201ENST00000572844 EPHB1P54762 984 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 TIAL1Q01085 375 aaKnown RBP eCLIP16.31■□□□□ 0.2
POLR2A-201ENST00000572844 CCNIQ14094 377 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 NXNQ6DKJ4 435 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 AFTPHQ6ULP2 937 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 CUZD1Q86UP6 607 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 OR13C4Q8NGS5 318 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 MYCBPQ99417 103 aaPredicted RBP16.31■□□□□ 0.2
POLR2A-201ENST00000572844 AARSD1Q9BTE6 412 aaKnown RBP16.31■□□□□ 0.2
POLR2A-201ENST00000572844 SPON2Q9BUD6 331 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 GSTO2Q9H4Y5 243 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 CYP4F11Q9HBI6 524 aa16.31■□□□□ 0.2
POLR2A-201ENST00000572844 SMIM24O75264 130 aa16.3■□□□□ 0.2
POLR2A-201ENST00000572844 ZMPSTE24O75844 475 aa16.3■□□□□ 0.2
POLR2A-201ENST00000572844 HNRNPLP14866 589 aaKnown RBP eCLIP16.3■□□□□ 0.2
POLR2A-201ENST00000572844 DSG1Q02413 1049 aa16.3■□□□□ 0.2
POLR2A-201ENST00000572844 SEMA3AQ14563 771 aa16.3■□□□□ 0.2
POLR2A-201ENST00000572844 CYTH1Q15438 398 aa16.3■□□□□ 0.2
POLR2A-201ENST00000572844 ZNF678Q5SXM1 525 aa16.3■□□□□ 0.2
POLR2A-201ENST00000572844 CATSPER2Q96P56 530 aa16.3■□□□□ 0.2
POLR2A-201ENST00000572844 TDRD1Q9BXT4 1180 aaKnown RBP16.3■□□□□ 0.2
POLR2A-201ENST00000572844 PPP1R12CQ9BZL4 782 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms