RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 DCP2Q8IU60 420 aaKnown RBP7.52□□□□□ -1.21
NUP88-205ENST00000572809 LZTR1Q8N653 840 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 EID2Q8N6I1 236 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 OR8K1Q8NGG5 319 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 HCAR2Q8TDS4 363 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 HSPH1Q92598 858 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 VOPP1Q96AW1 172 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 ARHGEF26Q96DR7 871 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 CELF6Q96J87 481 aaKnown RBP7.52□□□□□ -1.21
NUP88-205ENST00000572809 BMFQ96LC9 184 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 LENG8Q96PV6 779 aaPredicted RBP7.52□□□□□ -1.21
NUP88-205ENST00000572809 MYOCQ99972 504 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 NUP85Q9BW27 656 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 TSPY26PQ9H489 355 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 ZWILCHQ9H900 591 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 FZD3Q9NPG1 666 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 UBA2Q9UBT2 640 aaPredicted RBP7.52□□□□□ -1.21
NUP88-205ENST00000572809 FTSJ1Q9UET6 329 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 IP6K2Q9UHH9 426 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 KLK13Q9UKR3 277 aa7.52□□□□□ -1.21
NUP88-205ENST00000572809 CHD5Q8TDI0 1954 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 H3BRJ5 948 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 MYO1FO00160 1098 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 DFFAO00273 331 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 FPGTO14772 594 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 INSIG1O15503 277 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 PALMO75781 387 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 PROS1P07225 676 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 TCF4P15884 667 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 XPAP23025 273 aaPredicted RBP7.51□□□□□ -1.21
NUP88-205ENST00000572809 EPHA8P29322 1005 aaPredicted RBP7.51□□□□□ -1.21
NUP88-205ENST00000572809 HNRNPH3P31942 346 aaKnown RBP7.51□□□□□ -1.21
NUP88-205ENST00000572809 EIF4A3P38919 411 aaKnown RBP7.51□□□□□ -1.21
NUP88-205ENST00000572809 ARL4AP40617 200 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 CSNK1DP48730 415 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 CLDN2P57739 230 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 IL10RBQ08334 325 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 NSUN2Q08J23 767 aaKnown RBP eCLIP7.51□□□□□ -1.21
NUP88-205ENST00000572809 FGL2Q14314 439 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 DPYSL2Q16555 572 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 PRRT3Q5FWE3 981 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 AFMIDQ63HM1 303 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 SPECC1LQ69YQ0 1117 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 UNQ6494/PRO21346Q6UXR6 183 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 Q6ZSR6 202 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 POLNQ7Z5Q5 900 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 ABI3BPQ7Z7G0 1075 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 KRTAP19-1Q8IUB9 90 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 ARHGAP12Q8IWW6 846 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 NIPA2Q8N8Q9 360 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 ASB12Q8WXK4 309 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 EXOC2Q96KP1 924 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 SLC30A3Q99726 388 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 CALN1Q9BXU9 219 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 LIN7BQ9HAP6 207 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 SP110Q9HB58 689 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 PDFQ9HBH1 243 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 KLHL11Q9NVR0 708 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 ZNHIT6Q9NWK9 470 aaKnown RBP7.51□□□□□ -1.21
NUP88-205ENST00000572809 DKK3Q9UBP4 350 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 LHX3Q9UBR4 397 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 IPO11Q9UI26 975 aaKnown RBP7.51□□□□□ -1.21
NUP88-205ENST00000572809 ANAPC7Q9UJX3 599 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 DOCK9Q9BZ29 2069 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 CABIN1Q9Y6J0 2220 aa7.51□□□□□ -1.21
NUP88-205ENST00000572809 POM121BA6NF01 834 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 A6NNZ2 444 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 ENC1O14682 589 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 AREL1O15033 823 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 RAD51BO15315 384 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 BUB1BO60566 1050 aaPredicted RBP7.5□□□□□ -1.21
NUP88-205ENST00000572809 SDC3O75056 442 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 TM7SF2O76062 418 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 PIGNO95427 931 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 C1SP09871 688 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 H2AFZP0C0S5 128 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 ITIH2P19823 946 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 SSR1P43307 286 aaKnown RBP7.5□□□□□ -1.21
NUP88-205ENST00000572809 RABIFP47224 123 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 SUOXP51687 545 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 DPYSQ14117 519 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 TRIM14Q14142 442 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 RFTN1Q14699 578 aaPredicted RBP7.5□□□□□ -1.21
NUP88-205ENST00000572809 SLC18A3Q16572 532 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 HADHQ16836 314 aaKnown RBP7.5□□□□□ -1.21
NUP88-205ENST00000572809 UGP2Q16851 508 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 SMTNL2Q2TAL5 461 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 TMEM52BQ4KMG9 183 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 CCDC157Q569K6 752 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 LRRC73Q5JTD7 316 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 TXNRD3NBQ6F5E7 133 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 CCNI2Q6ZMN8 369 aaPredicted RBP7.5□□□□□ -1.21
NUP88-205ENST00000572809 GCNT7Q6ZNI0 430 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 ARHGAP36Q6ZRI8 547 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 H2AFVQ71UI9 128 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 TMPRSS7Q7RTY8 843 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 KANSL1Q7Z3B3 1105 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 SRLQ86TD4 932 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 VSTM4Q8IW00 320 aa7.5□□□□□ -1.21
NUP88-205ENST00000572809 SLC25A45Q8N413 288 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms