RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 UBP1Q9NZI7 540 aa15.88■□□□□ 0.13
CHD3-215ENST00000572750 A0A0U1RQS6 177 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 A0A1W2PQ67 120 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 A0A1W2PR77 199 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 NPIPB15A6NHN6 443 aaPredicted RBP15.87■□□□□ 0.13
CHD3-215ENST00000572750 KIF5CO60282 957 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 TM7SF2O76062 418 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 KCNK5O95279 499 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 MT-CYBP00156 380 aaPredicted RBP15.87■□□□□ 0.13
CHD3-215ENST00000572750 ELFN1P0C7U0 828 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 LHCGRP22888 699 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 LIMK1P53667 647 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 C21orf59P57076 290 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 SGCGQ13326 291 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 GALNT3Q14435 633 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 TSPAN33Q86UF1 283 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 ZSCAN30Q86W11 494 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 MINDY1Q8N5J2 469 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 TTC13Q8NBP0 860 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 UBE2Q2Q8WVN8 375 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 PIH1D2Q8WWB5 315 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 C1QTNF2Q9BXJ5 285 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 PCDH9Q9HC56 1237 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 TMEM9BQ9NQ34 198 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 DNPEPQ9ULA0 475 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 PHTF1Q9UMS5 762 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 LHX6Q9UPM6 363 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 ANKRD6Q9Y2G4 727 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 SNX11Q9Y5W9 270 aa15.87■□□□□ 0.13
CHD3-215ENST00000572750 GOLGA8CPA6NN73 597 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 CDX4O14627 284 aaPredicted RBP15.86■□□□□ 0.13
CHD3-215ENST00000572750 VILLO15195 856 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 PMPCBO75439 489 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 PRLP01236 227 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 ATP1A1P05023 1023 aaKnown RBP15.86■□□□□ 0.13
CHD3-215ENST00000572750 SYPP08247 313 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 VIPR1P32241 457 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 ATXN3P54252 364 aaPredicted RBP15.86■□□□□ 0.13
CHD3-215ENST00000572750 EPHB1P54762 984 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 STAT4Q14765 748 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 IRF4Q15306 451 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 CNGA3Q16281 694 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 STPG1Q5TH74 334 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 USP45Q70EL2 814 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 PID1Q7Z2X4 250 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 KDELC2Q7Z4H8 507 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 PTAR1Q7Z6K3 402 aaPredicted RBP15.86■□□□□ 0.13
CHD3-215ENST00000572750 SLC35B2Q8TB61 432 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 CCDC110Q8TBZ0 833 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 TADA1Q96BN2 335 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 OXNAD1Q96HP4 312 aaPredicted RBP15.86■□□□□ 0.13
CHD3-215ENST00000572750 MCCC1Q96RQ3 725 aaPredicted RBP15.86■□□□□ 0.13
CHD3-215ENST00000572750 VAT1Q99536 393 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 KLF6Q99612 283 aaPredicted RBP15.86■□□□□ 0.13
CHD3-215ENST00000572750 GBA3Q9H227 469 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 IL21RQ9HBE5 538 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 RSPH14Q9UHP6 348 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 JRKLQ9Y4A0 524 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 TENM4Q6N022 2769 aa15.86■□□□□ 0.13
CHD3-215ENST00000572750 A0A0J9YYE9 177 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 POM121BA6NF01 834 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 CAPN8A6NHC0 703 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 C4orf47A7E2U8 309 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 TAF4O00268 1085 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 LZTS3O60299 673 aaPredicted RBP15.85■□□□□ 0.13
CHD3-215ENST00000572750 CEP104O60308 925 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 STK10O94804 968 aaKnown RBP15.85■□□□□ 0.13
CHD3-215ENST00000572750 HEXIM1O94992 359 aaKnown RBP15.85■□□□□ 0.13
CHD3-215ENST00000572750 TRBC1P01850 177 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 FGGP02679 453 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 GM2AP17900 193 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 HNF1BP35680 557 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 IGFALSP35858 605 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 CTSKP43235 329 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 GDF10P55107 478 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 ANKRD20A2Q5SQ80 823 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 ANKRD20A1Q5TYW2 823 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 ANKRD20A3Q5VUR7 823 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 DENND2CQ68D51 928 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 LIPIQ6XZB0 460 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 FAM71DQ8N9W8 422 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 MFSD2AQ8NA29 543 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 TP53I13Q8NBR0 393 aaPredicted RBP15.85■□□□□ 0.13
CHD3-215ENST00000572750 DENND6BQ8NEG7 585 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 OR13H1Q8NG92 308 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 C1orf54Q8WWF1 131 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 TRIB3Q96RU7 358 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 FERMT1Q9BQL6 677 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 GORASP1Q9BQQ3 440 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 TMEM121Q9BTD3 319 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 ZDHHC5Q9C0B5 715 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 USP29Q9HBJ7 922 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 MBNL1Q9NR56 388 aaKnown RBP15.85■□□□□ 0.13
CHD3-215ENST00000572750 TRHDEQ9UKU6 1024 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 FNDC3AQ9Y2H6 1198 aaKnown RBP15.85■□□□□ 0.13
CHD3-215ENST00000572750 SCN8AQ9UQD0 1980 aa15.85■□□□□ 0.13
CHD3-215ENST00000572750 A6NNZ2 444 aa15.84■□□□□ 0.13
CHD3-215ENST00000572750 TLR4O00206 839 aa15.84■□□□□ 0.13
CHD3-215ENST00000572750 GIPC1O14908 333 aa15.84■□□□□ 0.13
CHD3-215ENST00000572750 LIASO43766 372 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms