RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 MSNP26038 577 aaKnown RBP16.22■□□□□ 0.19
LITAF-210ENST00000571976 HNF1BP35680 557 aa16.22■□□□□ 0.19
LITAF-210ENST00000571976 RABIFP47224 123 aa16.22■□□□□ 0.19
LITAF-210ENST00000571976 ARHGEF7Q14155 803 aa16.22■□□□□ 0.19
LITAF-210ENST00000571976 CNGA3Q16281 694 aa16.22■□□□□ 0.19
LITAF-210ENST00000571976 WSCD2Q2TBF2 565 aa16.22■□□□□ 0.19
LITAF-210ENST00000571976 ITPRIPL1Q6GPH6 555 aa16.22■□□□□ 0.19
LITAF-210ENST00000571976 Q6ZSR6 202 aa16.22■□□□□ 0.19
LITAF-210ENST00000571976 SPATS2Q86XZ4 545 aaKnown RBP16.22■□□□□ 0.19
LITAF-210ENST00000571976 CBARPQ8N350 705 aaPredicted RBP16.22■□□□□ 0.19
LITAF-210ENST00000571976 OXR1Q8N573 874 aa16.22■□□□□ 0.19
LITAF-210ENST00000571976 TP53I13Q8NBR0 393 aaPredicted RBP16.22■□□□□ 0.19
LITAF-210ENST00000571976 LPCAT1Q8NF37 534 aa16.22■□□□□ 0.19
LITAF-210ENST00000571976 SLC35B2Q8TB61 432 aa16.22■□□□□ 0.19
LITAF-210ENST00000571976 IFT43Q96FT9 208 aa16.22■□□□□ 0.19
LITAF-210ENST00000571976 ELF4Q99607 663 aaPredicted RBP16.22■□□□□ 0.19
LITAF-210ENST00000571976 IL21RQ9HBE5 538 aa16.22■□□□□ 0.19
LITAF-210ENST00000571976 USP29Q9HBJ7 922 aa16.22■□□□□ 0.19
LITAF-210ENST00000571976 KCTD5Q9NXV2 234 aa16.22■□□□□ 0.19
LITAF-210ENST00000571976 FAM153AQ9UHL3 310 aa16.22■□□□□ 0.19
LITAF-210ENST00000571976 RSPH14Q9UHP6 348 aa16.22■□□□□ 0.19
LITAF-210ENST00000571976 R3HDM2Q9Y2K5 976 aaKnown RBP16.22■□□□□ 0.19
LITAF-210ENST00000571976 COQ6Q9Y2Z9 468 aa16.22■□□□□ 0.19
LITAF-210ENST00000571976 CAPN8A6NHC0 703 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 KIF5CO60282 957 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 PMPCBO75439 489 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 MT-CYBP00156 380 aaPredicted RBP16.21■□□□□ 0.19
LITAF-210ENST00000571976 ZNF30P17039 623 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 LHCGRP22888 699 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 IGFALSP35858 605 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 PFN3P60673 137 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 YPEL5P62699 121 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 CDK18Q07002 472 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 ACOX1Q15067 660 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 PTPRRQ15256 657 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 PCSK7Q16549 785 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 QPCTQ16769 361 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 ZNF569Q5MCW4 686 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 ANKRD20A2Q5SQ80 823 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 ANKRD20A1Q5TYW2 823 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 ANKRD20A3Q5VUR7 823 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 CCDC70Q6NSX1 233 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 CRTC1Q6UUV9 634 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 PTAR1Q7Z6K3 402 aaPredicted RBP16.21■□□□□ 0.19
LITAF-210ENST00000571976 COQ10AQ96MF6 247 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 TRIB3Q96RU7 358 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 LYSMD1Q96S90 227 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 MLPHQ9BV36 600 aaPredicted RBP16.21■□□□□ 0.19
LITAF-210ENST00000571976 MBNL1Q9NR56 388 aaKnown RBP16.21■□□□□ 0.19
LITAF-210ENST00000571976 GPR27Q9NS67 375 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 TM7SF3Q9NS93 570 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 UBP1Q9NZI7 540 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 FNDC3AQ9Y2H6 1198 aaKnown RBP16.21■□□□□ 0.19
LITAF-210ENST00000571976 PCDHGB2Q9Y5G2 931 aa16.21■□□□□ 0.19
LITAF-210ENST00000571976 A0A1B0GTQ1 180 aa16.2■□□□□ 0.18
LITAF-210ENST00000571976 C5orf60A6NFR6 353 aa16.2■□□□□ 0.18
LITAF-210ENST00000571976 ENC1O14682 589 aa16.2■□□□□ 0.18
LITAF-210ENST00000571976 YKT6O15498 198 aa16.2■□□□□ 0.18
LITAF-210ENST00000571976 EPOP01588 193 aa16.2■□□□□ 0.18
LITAF-210ENST00000571976 TNNT3P45378 269 aaPredicted RBP16.2■□□□□ 0.18
LITAF-210ENST00000571976 RXRGP48443 463 aa16.2■□□□□ 0.18
LITAF-210ENST00000571976 ARRB1P49407 418 aaPredicted RBP16.2■□□□□ 0.18
LITAF-210ENST00000571976 CCT8P50990 548 aa16.2■□□□□ 0.18
LITAF-210ENST00000571976 IRF4Q15306 451 aa16.2■□□□□ 0.18
LITAF-210ENST00000571976 KDELC2Q7Z4H8 507 aa16.2■□□□□ 0.18
LITAF-210ENST00000571976 TSPAN33Q86UF1 283 aa16.2■□□□□ 0.18
LITAF-210ENST00000571976 SLC22A18ASQ8N1D0 253 aa16.2■□□□□ 0.18
LITAF-210ENST00000571976 MAIP1Q8WWC4 291 aa16.2■□□□□ 0.18
LITAF-210ENST00000571976 SPATA13Q96N96 652 aa16.2■□□□□ 0.18
LITAF-210ENST00000571976 PPP1R2P1Q96PQ5 205 aa16.2■□□□□ 0.18
LITAF-210ENST00000571976 GBA3Q9H227 469 aa16.2■□□□□ 0.18
LITAF-210ENST00000571976 KNL1Q8NG31 2342 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 LOC285095A0A1B0GVY8 99 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 LIASO43766 372 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 CEP104O60308 925 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 ANXA9O76027 345 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 NDST3O95803 873 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 CD59P13987 128 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 GM2AP17900 193 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 STIP1P31948 543 aaKnown RBP16.19■□□□□ 0.18
LITAF-210ENST00000571976 CXCR5P32302 372 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 WNT3AP56704 352 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 PTSQ03393 145 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 MPP3Q13368 585 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 MTM1Q13496 603 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 PTK2BQ14289 1009 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 GALNT3Q14435 633 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 PRPSAP1Q14558 356 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 INPP5AQ14642 412 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 SUZ12Q15022 739 aaKnown RBP16.19■□□□□ 0.18
LITAF-210ENST00000571976 PRAMEF14Q5SWL7 426 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 LRRC66Q68CR7 880 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 DENND2CQ68D51 928 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 KDELC1Q6UW63 502 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 HSD11B1LQ7Z5J1 315 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 RAVER1Q8IY67 606 aaKnown RBP16.19■□□□□ 0.18
LITAF-210ENST00000571976 SLC35F6Q8N357 371 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 FAM71DQ8N9W8 422 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 CCDC110Q8TBZ0 833 aa16.19■□□□□ 0.18
LITAF-210ENST00000571976 ATG4AQ8WYN0 398 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms