RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 PASD1Q8IV76 773 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 NAGSQ8N159 534 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 EHBP1Q8NDI1 1231 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 ZNF397Q8NF99 534 aaPredicted RBP10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 PRR7Q8TB68 274 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 PDCD6IPQ8WUM4 868 aaKnown RBP10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 GDAP1L1Q96MZ0 367 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 TBCBQ99426 244 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 DPYSL5Q9BPU6 564 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 ZPBPQ9BS86 351 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 PCDH12Q9NPG4 1184 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 FBXO8Q9NRD0 319 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 RRN3Q9NYV6 651 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 TAAR2Q9P1P5 351 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 PPARGC1AQ9UBK2 798 aaKnown RBP10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 POLHQ9Y253 713 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 MFHAS1Q9Y4C4 1052 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 PCDHB3Q9Y5E6 796 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 ST14Q9Y5Y6 855 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 RPS6KL1Q9Y6S9 549 aa10.47□□□□□ -0.73
CTDNEP1-202ENST00000570380 CROCCQ5TZA2 2017 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 PRSS38A1L453 326 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 A8MU76 341 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 DNAJB5O75953 348 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 TMCC1O94876 653 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 PIGNO95427 931 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 F9P00740 461 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 PRF1P14222 555 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 KELP23276 732 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 TRIM23P36406 574 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 DLSTP36957 453 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 ETFBP38117 255 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 STAT1P42224 750 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 NDUFA8P51970 172 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 RNASE9P60153 205 aaKnown RBP10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 CETN1Q12798 172 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 BIRC2Q13490 618 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 TSR1Q2NL82 804 aaKnown RBP10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 PRR30Q53SZ7 412 aaPredicted RBP10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 SNAP47Q5SQN1 464 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 ARHGAP22Q7Z5H3 698 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 PELI3Q8N2H9 469 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 ESX1Q8N693 406 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 TSG101Q99816 390 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 GSDMCQ9BYG8 508 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 TRIM55Q9BYV6 548 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 SUDS3Q9H7L9 328 aaPredicted RBP10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 CARS2Q9HA77 564 aaKnown RBP10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 UBE2TQ9NPD8 197 aaPredicted RBP10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 DNAI1Q9UI46 699 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 STAP1Q9ULZ2 295 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 HPCAL4Q9UM19 191 aa10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 OAS3Q9Y6K5 1087 aaKnown RBP10.46□□□□□ -0.73
CTDNEP1-202ENST00000570380 DIDO1Q9BTC0 2240 aaKnown RBP10.46□□□□□ -0.74
CTDNEP1-202ENST00000570380 FAM237AA0A1B0GTK4 181 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 TSPAN11A1L157 253 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 BECN2A8MW95 431 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 P4HA2O15460 535 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 KDELR3O43731 214 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 RECQL5O94762 991 aaPredicted RBP10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 IGSF6O95976 241 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 F13A1P00488 732 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 GM2AP17900 193 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 MAN1A1P33908 653 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 MMP12P39900 470 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 DNM1Q05193 864 aaKnown RBP10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 MAP7Q14244 749 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 INPP5JQ15735 1006 aaPredicted RBP10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 SLC25A52Q3SY17 297 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 PTPN20Q4JDL3 420 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 ATL3Q6DD88 541 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 SLC30A9Q6PML9 568 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 KRBA2Q6ZNG9 492 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 NLRP14Q86W24 1093 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 ZSWIM9Q86XI8 627 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 ZNF761Q86XN6 746 aaPredicted RBP10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 APLFQ8IW19 511 aaPredicted RBP10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 C1orf131Q8NDD1 294 aaKnown RBP10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 HCAR2Q8TDS4 363 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 PTCD2Q8WV60 388 aaKnown RBP10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 RNF31Q96EP0 1072 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 MAGEH1Q9H213 219 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 CROTQ9UKG9 612 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 CFAP45Q9UL16 551 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 PCDHGC3Q9UN70 934 aa10.45□□□□□ -0.74
CTDNEP1-202ENST00000570380 AKAP9Q99996 3911 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 CDC14CA4D256 554 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 CFAP69A5D8W1 941 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 TEX33O43247 280 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 BUB1O43683 1085 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 CEACAM5P06731 702 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 ZSCAN22P10073 491 aaPredicted RBP10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 ZNF28P17035 718 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 MAPKAPK2P49137 400 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 RHOAP61586 193 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 GPLD1P80108 840 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 ILF3Q12906 894 aaKnown RBP eCLIP10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 RALGDSQ12967 914 aa10.44□□□□□ -0.74
CTDNEP1-202ENST00000570380 SEMA5AQ13591 1074 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms