RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 UBA7P41226 1012 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 GNAQP50148 359 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 PSMC6P62333 389 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 YPEL5P62699 121 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 NUCB2P80303 420 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 IRF3Q14653 427 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 TAF11Q15544 211 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 ATG9BQ674R7 924 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 ZNF530Q6P9A1 599 aaPredicted RBP3.88□□□□□ -1.79
UBR1-211ENST00000569971 PNLDC1Q8NA58 520 aaKnown RBP3.88□□□□□ -1.79
UBR1-211ENST00000569971 FAM47BQ8NA70 645 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 GPR150Q8NGU9 434 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 ZFPM2Q8WW38 1151 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 KAT2BQ92831 832 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 TEFMQ96QE5 360 aaKnown RBP3.88□□□□□ -1.79
UBR1-211ENST00000569971 TIMP4Q99727 224 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 IFT27Q9BW83 186 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 HIPK3Q9H422 1215 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 ZNF304Q9HCX3 659 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 ASB6Q9NWX5 421 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 GRHL1Q9NZI5 618 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 NFKBIL1Q9UBC1 381 aaPredicted RBP3.88□□□□□ -1.79
UBR1-211ENST00000569971 SERGEFQ9UGK8 458 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 CDH22Q9UJ99 828 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 MAFFQ9ULX9 164 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 SLIT3O75094 1523 aa3.88□□□□□ -1.79
UBR1-211ENST00000569971 MED1Q15648 1581 aaPredicted RBP3.88□□□□□ -1.79
UBR1-211ENST00000569971 IBTKQ9P2D0 1353 aaPredicted RBP3.88□□□□□ -1.79
UBR1-211ENST00000569971 CACNA1FO60840 1977 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 KDM3BQ7LBC6 1761 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 A0A1W2PQF6 199 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 SLC22A23A1A5C7 686 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 SLC25A17O43808 307 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 PAGE4O60829 102 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 OR2C1O95371 312 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 PLAUP00749 431 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 CHRM5P08912 532 aaPredicted RBP3.87□□□□□ -1.79
UBR1-211ENST00000569971 CDK4P11802 303 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 MCM3P25205 808 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 POU1F1P28069 291 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 TACR3P29371 465 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 CHRNA5P30532 468 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 PIP4K2AP48426 406 aaPredicted RBP3.87□□□□□ -1.79
UBR1-211ENST00000569971 BLKP51451 505 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 CACNA2D1P54289 1103 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 SOX10P56693 466 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 PRAMEP78395 509 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 POU5F1Q01860 360 aaKnown RBP3.87□□□□□ -1.79
UBR1-211ENST00000569971 GOLGA8DPQ0D2H9 430 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 EPS8Q12929 822 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 STK4Q13043 487 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 GALNT3Q14435 633 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 CRYMQ14894 314 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 VEPH1Q14D04 833 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 PPP2R5BQ15173 497 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 RNPS1Q15287 305 aaKnown RBP3.87□□□□□ -1.79
UBR1-211ENST00000569971 DPCR1Q3MIW9 517 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 KIAA1755Q5JYT7 1200 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 TBC1D9BQ66K14 1250 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 TXNDC8Q6A555 127 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 CHST9Q7L1S5 443 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 RD3Q7Z3Z2 195 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 TRIM74Q86UV6 250 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 TRIM73Q86UV7 250 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 ADGRF2Q8IZF7 708 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 FAR1Q8WVX9 515 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 PSPC1Q8WXF1 523 aaKnown RBP3.87□□□□□ -1.79
UBR1-211ENST00000569971 POMGNT1Q8WZA1 660 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 GTF3C6Q969F1 213 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 FAM149B1Q96BN6 582 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 FEM1CQ96JP0 617 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 UROC1Q96N76 676 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 FRG2BQ96QU4 278 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 MAP7D2Q96T17 732 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 H2AFJQ9BTM1 129 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 STRA6Q9BX79 667 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 NUF2Q9BZD4 464 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 KLK15Q9H2R5 256 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 FBRSL1Q9HCM7 1045 aaKnown RBP3.87□□□□□ -1.79
UBR1-211ENST00000569971 NCKIPSDQ9NZQ3 722 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 DBF4Q9UBU7 674 aaPredicted RBP3.87□□□□□ -1.79
UBR1-211ENST00000569971 FBXO40Q9UH90 709 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 IPO11Q9UI26 975 aaKnown RBP3.87□□□□□ -1.79
UBR1-211ENST00000569971 HAO1Q9UJM8 370 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 SLC8A2Q9UPR5 921 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 EXOC6BQ9Y2D4 811 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 MST1RQ04912 1400 aa3.87□□□□□ -1.79
UBR1-211ENST00000569971 DDTLA6NHG4 134 aaPredicted RBP3.86□□□□□ -1.79
UBR1-211ENST00000569971 FAM157AC9JC47 383 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 INPPL1O15357 1258 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 RNMTO43148 476 aaKnown RBP3.86□□□□□ -1.79
UBR1-211ENST00000569971 SURF6O75683 361 aaKnown RBP3.86□□□□□ -1.79
UBR1-211ENST00000569971 CLTBP09497 229 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 CYP2A6P11509 494 aaPredicted RBP3.86□□□□□ -1.79
UBR1-211ENST00000569971 CDH2P19022 906 aaPredicted RBP3.86□□□□□ -1.79
UBR1-211ENST00000569971 WT1P19544 449 aaPredicted RBP3.86□□□□□ -1.79
UBR1-211ENST00000569971 EIF2S2P20042 333 aaKnown RBP3.86□□□□□ -1.79
UBR1-211ENST00000569971 EIF2DP41214 584 aaKnown RBP3.86□□□□□ -1.79
UBR1-211ENST00000569971 DPP6P42658 865 aa3.86□□□□□ -1.79
UBR1-211ENST00000569971 CDH8P55286 799 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms