RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 RGS2P41220 211 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 MCM2P49736 904 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 PPP5CP53041 499 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 UBASH3AP57075 661 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 POLR2FP61218 127 aaKnown RBP4.91□□□□□ -1.62
CHD9-220ENST00000569794 TFCP2Q12800 502 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 SLMAPQ14BN4 828 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 P3H1Q32P28 736 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 SETMARQ53H47 684 aaPredicted RBP4.91□□□□□ -1.62
CHD9-220ENST00000569794 KRTCAP3Q53RY4 240 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 WBP2NLQ6ICG8 309 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 RAB12Q6IQ22 244 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 C8orf82Q6P1X6 216 aaPredicted RBP4.91□□□□□ -1.62
CHD9-220ENST00000569794 KIAA0408Q6ZU52 694 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 KRT27Q7Z3Y8 459 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 RASGRP3Q8IV61 690 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 CNTROBQ8N137 903 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 USP38Q8NB14 1042 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 UTP15Q8TED0 518 aaKnown RBP4.91□□□□□ -1.62
CHD9-220ENST00000569794 CPT1BQ92523 772 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 VPS33AQ96AX1 596 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 ZNF653Q96CK0 615 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 RTP4Q96DX8 246 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 LBHD1Q9BQE6 289 aaPredicted RBP4.91□□□□□ -1.62
CHD9-220ENST00000569794 ACAT2Q9BWD1 397 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 APOL6Q9BWW8 343 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 NDST4Q9H3R1 872 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 PDE7BQ9NP56 450 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 COQ3Q9NZJ6 369 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 MORF4L1Q9UBU8 362 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 PCDHB7Q9Y5E2 793 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 FAM169AQ9Y6X4 670 aa4.91□□□□□ -1.62
CHD9-220ENST00000569794 PEX12O00623 359 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 TNPO2O14787 897 aaKnown RBP4.9□□□□□ -1.63
CHD9-220ENST00000569794 CCNDBP1O95273 360 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 GGPS1O95749 300 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 LCKP06239 509 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 SPARCP09486 303 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 ZNF12P17014 697 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 SERPINA4P29622 427 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 PPARGP37231 505 aaPredicted RBP4.9□□□□□ -1.63
CHD9-220ENST00000569794 PEX19P40855 299 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 CD86P42081 329 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 HMGN5P82970 282 aaKnown RBP4.9□□□□□ -1.63
CHD9-220ENST00000569794 PDCLQ13371 301 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 PPA1Q15181 289 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 E2F5Q15329 346 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 KYNUQ16719 465 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 SLC5A9Q2M3M2 681 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 KRT71Q3SY84 523 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 ALG10Q5BKT4 473 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 ALG10BQ5I7T1 473 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 NAA35Q5VZE5 725 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 DCLRE1AQ6PJP8 1040 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 CYP20A1Q6UW02 462 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 SYNE3Q6ZMZ3 975 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 KIAA2013Q8IYS2 634 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 ADGRF3Q8IZF5 1079 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 CCAR2Q8N163 923 aaKnown RBP4.9□□□□□ -1.63
CHD9-220ENST00000569794 ZNF619Q8N2I2 560 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 Q8NFD4 153 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 NFKBIDQ8NI38 313 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 SCFD2Q8WU76 684 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 NPIPB3Q92617 1050 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 TAF4BQ92750 862 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 GRAMD1AQ96CP6 724 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 KIF1BPQ96EK5 621 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 RBM17Q96I25 401 aaKnown RBP4.9□□□□□ -1.63
CHD9-220ENST00000569794 SPRY4Q9C004 299 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 DNAI2Q9GZS0 605 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 TXNRD2Q9NNW7 524 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 PNRC2Q9NPJ4 139 aaKnown RBP4.9□□□□□ -1.63
CHD9-220ENST00000569794 RNF146Q9NTX7 359 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 FBXO28Q9NVF7 368 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 HCFC1R1Q9NWW0 138 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 HPF1Q9NWY4 346 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 DCAF16Q9NXF7 216 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 MRPL15Q9P015 296 aaKnown RBP4.9□□□□□ -1.63
CHD9-220ENST00000569794 NDUFAF4Q9P032 175 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 CORO1CQ9ULV4 474 aaPredicted RBP4.9□□□□□ -1.63
CHD9-220ENST00000569794 CA14Q9ULX7 337 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 DTNAQ9Y4J8 743 aa4.9□□□□□ -1.63
CHD9-220ENST00000569794 ABCC9O60706 1549 aa4.89□□□□□ -1.63
CHD9-220ENST00000569794 A0A1W2PQ09 198 aa4.89□□□□□ -1.63
CHD9-220ENST00000569794 ADAM20O43506 726 aa4.89□□□□□ -1.63
CHD9-220ENST00000569794 GUCA1CO95843 209 aa4.89□□□□□ -1.63
CHD9-220ENST00000569794 P4HA1P13674 534 aa4.89□□□□□ -1.63
CHD9-220ENST00000569794 HLA-DPA1P20036 260 aa4.89□□□□□ -1.63
CHD9-220ENST00000569794 EPHA8P29322 1005 aaPredicted RBP4.89□□□□□ -1.63
CHD9-220ENST00000569794 TLX1P31314 330 aaPredicted RBP4.89□□□□□ -1.63
CHD9-220ENST00000569794 PMS2P54278 862 aa4.89□□□□□ -1.63
CHD9-220ENST00000569794 RAD23AP54725 363 aa4.89□□□□□ -1.63
CHD9-220ENST00000569794 TRAF2Q12933 501 aa4.89□□□□□ -1.63
CHD9-220ENST00000569794 GALNT3Q14435 633 aa4.89□□□□□ -1.63
CHD9-220ENST00000569794 ZRSR1Q15695 479 aaKnown RBP4.89□□□□□ -1.63
CHD9-220ENST00000569794 ADIPOQQ15848 244 aa4.89□□□□□ -1.63
CHD9-220ENST00000569794 DUSP6Q16828 381 aa4.89□□□□□ -1.63
CHD9-220ENST00000569794 C5orf22Q49AR2 442 aa4.89□□□□□ -1.63
CHD9-220ENST00000569794 TDRD12Q587J7 1177 aaKnown RBP4.89□□□□□ -1.63
CHD9-220ENST00000569794 C10orf76Q5T2E6 689 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms