RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 MMP12P39900 470 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 SUOXP51687 545 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 SEMG2Q02383 582 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 RALGDSQ12967 914 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 MTAPQ13126 283 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 TAF1AQ15573 450 aaPredicted RBP12.53□□□□□ -0.4
EDC3-217ENST00000569606 TSTD2Q5T7W7 516 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 AGBL4Q5VU57 503 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 CRTC1Q6UUV9 634 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 CES3Q6UWW8 571 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 LYSMD3Q7Z3D4 306 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 TMEM135Q86UB9 458 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 TSPAN33Q86UF1 283 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 CCNJLQ8IV13 435 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 HDDC3Q8N4P3 179 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 ZNF778Q96MU6 729 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 SRPK1Q96SB4 655 aaKnown RBP12.53□□□□□ -0.4
EDC3-217ENST00000569606 OMDQ99983 421 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 NAT9Q9BTE0 207 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 IER2Q9BTL4 223 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 SEMA4AQ9H3S1 761 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 TRABDQ9H4I3 376 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 PLAC1Q9HBJ0 212 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 ZC3H7BQ9UGR2 993 aaKnown RBP12.53□□□□□ -0.4
EDC3-217ENST00000569606 FADS3Q9Y5Q0 445 aa12.53□□□□□ -0.4
EDC3-217ENST00000569606 C1orf232A0A0U1RR37 186 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 CCDC78A2IDD5 438 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 TMEM221A6NGB7 291 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 A8MX80 341 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 M0R296 226 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 BUD23O43709 281 aaKnown RBP12.52□□□□□ -0.41
EDC3-217ENST00000569606 RNASEH2AO75792 299 aaKnown RBP12.52□□□□□ -0.41
EDC3-217ENST00000569606 CLDN7O95471 211 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 CYP2A6P11509 494 aaPredicted RBP12.52□□□□□ -0.41
EDC3-217ENST00000569606 AOC1P19801 751 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 NMBRP28336 390 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 MAGEA9P43362 315 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 PMS2P54278 862 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 TAS2R38P59533 333 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 GPX6P59796 221 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 FAM193AP78312 1265 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 ELP6Q0PNE2 266 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 CNGA3Q16281 694 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 KYNUQ16719 465 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 TMEM52BQ4KMG9 183 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 BEND6Q5SZJ8 279 aaPredicted RBP12.52□□□□□ -0.41
EDC3-217ENST00000569606 UBAP2Q5T6F2 1119 aaKnown RBP12.52□□□□□ -0.41
EDC3-217ENST00000569606 STEAP4Q687X5 459 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 LRRC66Q68CR7 880 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 ERAP2Q6P179 960 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 KIAA1324Q6UXG2 1013 aaKnown RBP12.52□□□□□ -0.41
EDC3-217ENST00000569606 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.52□□□□□ -0.41
EDC3-217ENST00000569606 UNC5AQ6ZN44 842 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 USP30Q70CQ3 517 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 TRMT10CQ7L0Y3 403 aaKnown RBP12.52□□□□□ -0.41
EDC3-217ENST00000569606 DPPA4Q7L190 304 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 PALM2Q8IXS6 379 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 TSTD1Q8NFU3 115 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 STYXQ8WUJ0 223 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 HMGB4Q8WW32 186 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 RAB7BQ96AH8 199 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 EID2BQ96D98 161 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 MFSD3Q96ES6 412 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 CFAP36Q96G28 342 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 FCRL3Q96P31 734 aaPredicted RBP12.52□□□□□ -0.41
EDC3-217ENST00000569606 HHIPQ96QV1 700 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 GPR63Q9BZJ6 419 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 EPB41L4BQ9H329 900 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 ZFYVE1Q9HBF4 777 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 LRRC4CQ9HCJ2 640 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 TREX1Q9NSU2 369 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 FBXL12Q9NXK8 326 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 GGT7Q9UJ14 662 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 RIMKLBQ9ULI2 386 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 ITM2BQ9Y287 266 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 KCTD3Q9Y597 815 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.52□□□□□ -0.41
EDC3-217ENST00000569606 RPS6KL1Q9Y6S9 549 aa12.52□□□□□ -0.41
EDC3-217ENST00000569606 ZCWPW2A0A1B0GU75 182 aa12.51□□□□□ -0.41
EDC3-217ENST00000569606 C2orf81A6NN90 581 aa12.51□□□□□ -0.41
EDC3-217ENST00000569606 SLC7A4O43246 635 aa12.51□□□□□ -0.41
EDC3-217ENST00000569606 AP1G1O43747 822 aa12.51□□□□□ -0.41
EDC3-217ENST00000569606 USP1O94782 785 aa12.51□□□□□ -0.41
EDC3-217ENST00000569606 ALDH1A2O94788 518 aa12.51□□□□□ -0.41
EDC3-217ENST00000569606 PAPSS2O95340 614 aaPredicted RBP12.51□□□□□ -0.41
EDC3-217ENST00000569606 TTC4O95801 387 aa12.51□□□□□ -0.41
EDC3-217ENST00000569606 SLC4A1P02730 911 aa12.51□□□□□ -0.41
EDC3-217ENST00000569606 POLBP06746 335 aa12.51□□□□□ -0.41
EDC3-217ENST00000569606 C1SP09871 688 aa12.51□□□□□ -0.41
EDC3-217ENST00000569606 ACADMP11310 421 aa12.51□□□□□ -0.41
EDC3-217ENST00000569606 TSHRP16473 764 aa12.51□□□□□ -0.41
EDC3-217ENST00000569606 ZNF30P17039 623 aa12.51□□□□□ -0.41
EDC3-217ENST00000569606 LPOP22079 712 aaPredicted RBP12.51□□□□□ -0.41
EDC3-217ENST00000569606 PSMA3P25788 255 aa12.51□□□□□ -0.41
EDC3-217ENST00000569606 SSTR1P30872 391 aa12.51□□□□□ -0.41
EDC3-217ENST00000569606 HMGCLP35914 325 aa12.51□□□□□ -0.41
EDC3-217ENST00000569606 ZNF140P52738 457 aaPredicted RBP12.51□□□□□ -0.41
EDC3-217ENST00000569606 PDE1BQ01064 536 aa12.51□□□□□ -0.41
EDC3-217ENST00000569606 ACVR1Q04771 509 aa12.51□□□□□ -0.41
EDC3-217ENST00000569606 CCDC15Q0P6D6 951 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms