RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 SGTAO43765 313 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 CACNG3O60359 315 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 CCNT2O60583 730 aaKnown RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 TSPAN3O60637 253 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 SIX3O95343 332 aaPredicted RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 IRF1P10914 325 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 NCF1P14598 390 aaPredicted RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 PMLP29590 882 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 HADHAP40939 763 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 ACLYP53396 1101 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 HNRNPDQ14103 355 aaKnown RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 FLOT2Q14254 428 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 PTPRRQ15256 657 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 KIAA0930Q6ICG6 404 aaPredicted RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 IRGCQ6NXR0 463 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 KLC3Q6P597 504 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 PGM2L1Q6PCE3 622 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 KDELC1Q6UW63 502 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 PRSS55Q6UWB4 352 aaPredicted RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 ZNF598Q86UK7 904 aaKnown RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 SPATA24Q86W54 205 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 LGI2Q8N0V4 545 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 LILRB2Q8N423 598 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 ATP6V0D2Q8N8Y2 350 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 KDM1BQ8NB78 822 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 OR7D4Q8NG98 312 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 OR9I1Q8NGQ6 314 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 LINC01599Q8WXQ3 324 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 RMDN1Q96DB5 314 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 MRPL57Q9BQC6 102 aaKnown RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 RTKNQ9BST9 563 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 ZCWPW1Q9H0M4 648 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 ABCG4Q9H172 646 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 FBXO44Q9H4M3 255 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 COPS7BQ9H9Q2 264 aaPredicted RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 IL1RL2Q9HB29 575 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 PIDD1Q9HB75 910 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 VWA7Q9Y334 891 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 CAPN8A6NHC0 703 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 A6NHS1 94 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 TMEM88BA6NKF7 163 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 TARM1B6A8C7 271 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 EIF3FO00303 357 aaPredicted RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 H2AFYO75367 372 aaKnown RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 PEX11BO96011 259 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 TYMPP19971 482 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 ATP5F1P24539 256 aaPredicted RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 SCNN1BP51168 640 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 C1QTNF8P60827 252 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 MS4A2Q01362 244 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 POU4F1Q01851 419 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 NFE2Q16621 373 aaPredicted RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 AGKQ53H12 422 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 TMEM207Q6UWW9 146 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 RSPO2Q6UXX9 243 aaPredicted RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 RNF19BQ6ZMZ0 732 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 BNC2Q6ZN30 1099 aaPredicted RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 CUZD1Q86UP6 607 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 COLGALT2Q8IYK4 626 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 GALNT4Q8N4A0 578 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 BHLHE22Q8NFJ8 381 aaPredicted RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 IMP4Q96G21 291 aaKnown RBP8.79□□□□□ -1
LINC00558-201ENST00000569422 SLC45A3Q96JT2 553 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 UROC1Q96N76 676 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 TUBGCP5Q96RT8 1024 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 WDR41Q9HAD4 459 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 RGS18Q9NS28 235 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 SCML2Q9UQR0 700 aa8.79□□□□□ -1
LINC00558-201ENST00000569422 GOLGA8CPA6NN73 597 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 CA12O43570 354 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 TLR5O60602 858 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 SLC10A3P09131 477 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 LTA4HP09960 611 aaKnown RBP8.78□□□□□ -1
LINC00558-201ENST00000569422 RHOQP17081 205 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 DPP6P42658 865 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 CCNHP51946 323 aaPredicted RBP8.78□□□□□ -1
LINC00558-201ENST00000569422 MTTPP55157 894 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 BTKQ06187 659 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 RALGDSQ12967 914 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 LBRQ14739 615 aaKnown RBP8.78□□□□□ -1
LINC00558-201ENST00000569422 RNF180Q86T96 592 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 RDH11Q8TC12 318 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 PCDHAC1Q9H158 963 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 TMEM165Q9HC07 324 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.78□□□□□ -1
LINC00558-201ENST00000569422 LINC00854A0A1B0GVQ3 168 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 ARHGEF37A1IGU5 675 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 RNASEH1O60930 286 aaKnown RBP8.78□□□□□ -1
LINC00558-201ENST00000569422 ZNF189O75820 626 aaPredicted RBP8.78□□□□□ -1
LINC00558-201ENST00000569422 IPO13O94829 963 aaKnown RBP8.78□□□□□ -1
LINC00558-201ENST00000569422 GOT2P00505 430 aaKnown RBP8.78□□□□□ -1
LINC00558-201ENST00000569422 MMP2P08253 660 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 DNAJB2P25686 324 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 TPP2P29144 1249 aaPredicted RBP8.78□□□□□ -1
LINC00558-201ENST00000569422 ARL1P40616 181 aaPredicted RBP8.78□□□□□ -1
LINC00558-201ENST00000569422 SULT2A1Q06520 285 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 SREBF2Q12772 1141 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 PITRM1Q5JRX3 1037 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 ARTNQ5T4W7 220 aa8.78□□□□□ -1
LINC00558-201ENST00000569422 METTL21CQ5VZV1 264 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms