RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 COL21A1Q96P44 957 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 TMEM246Q9BRR3 403 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 TM9SF3Q9HD45 589 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 BIN3Q9NQY0 253 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 PCDHB16Q9NRJ7 776 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 KLHL11Q9NVR0 708 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 TMEM260Q9NX78 707 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 NID2Q14112 1375 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 TTLL13PA6NNM8 815 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 H3BSA7 217 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 DFFAO00273 331 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 PLIN3O60664 434 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 KPNA6O60684 536 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 ANXA3P12429 323 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 EIF2DP41214 584 aaKnown RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 MNDAP41218 407 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 SELPLGQ14242 412 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 C4orf19Q8IY42 314 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 ATP6V0D2Q8N8Y2 350 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 TRPV3Q8NET8 790 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 ZNF431Q8TF32 576 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 REXO5Q96IC2 774 aaKnown RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 MRPL9Q9BYD2 267 aaKnown RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 COQ10BQ9H8M1 238 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 UNKLQ9H9P5 680 aaKnown RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 ANKMY1Q9P2S6 941 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 ZNF232Q9UNY5 417 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 RBMX2Q9Y388 322 aaKnown RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 ALG5Q9Y673 324 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 MYO5CQ9NQX4 1742 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 PIGBOS1A0A0B4J2F0 54 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 RAB19A4D1S5 217 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 USP17L15C9J2P7 530 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 USP17L13C9JLJ4 530 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 USP17L11C9JVI0 530 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 USP17L18D6R9N7 530 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 USP17L22D6RA61 530 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 USP17L17D6RBQ6 530 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 USP17L19D6RCP7 530 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 USP17L20D6RJB6 530 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 H3BN98 237 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 M0R233 179 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 ATMINO43313 823 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 OTCP00480 354 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 EPCAMP16422 314 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 CHRM3P20309 590 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 CYP2F1P24903 491 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 AGTR1P30556 359 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 ACSL1P33121 698 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 PTGIRP43119 386 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 IDH2P48735 452 aaKnown RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 PTSQ03393 145 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 USP17L24Q0WX57 530 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 LMBRD2Q68DH5 695 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 ADNP2Q6IQ32 1131 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 USP17L6PQ6QN14 398 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 TIGD4Q8IY51 512 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 LSM14AQ8ND56 463 aaKnown RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 TBC1D15Q8TC07 691 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 JPH3Q8WXH2 748 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-216ENST00000569240 SCGB3A2Q96PL1 93 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 PANX3Q96QZ0 392 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 MOSPD1Q9UJG1 213 aa7.13□□□□□ -1.27
CNOT1-216ENST00000569240 E9PCH4 1651 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 H3BNH8 94 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 SUV39H1O43463 412 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 SLC19A2O60779 497 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 SEPHS1P49903 392 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 NME3Q13232 169 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 GRAPQ13588 217 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 CHRNA2Q15822 529 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 VMACQ2NL98 169 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 HYIQ5T013 277 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 ZPBP2Q6X784 338 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 NECAB2Q7Z6G3 386 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 ADAMTSL2Q86TH1 951 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 TMEM199Q8N511 208 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 OR5J2Q8NH18 312 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 GRAPLQ8TC17 118 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-216ENST00000569240 GLT1D1Q96MS3 346 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 MXRA8Q9BRK3 442 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 ZSCAN5AQ9BUG6 496 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 ACTR3BQ9P1U1 418 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 SPASTQ9UBP0 616 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 GABBR1Q9UBS5 961 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 ZNHIT2Q9UHR6 403 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 VPS28Q9UK41 221 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 SNCAIPQ9Y6H5 919 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 DISP2A7MBM2 1401 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 PREX2Q70Z35 1606 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 GRID2O43424 1007 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 RGS7P49802 495 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 PNLIPRP1P54315 467 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 GALNT3Q14435 633 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 KCTD19Q17RG1 926 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-216ENST00000569240 LYPLAL1Q5VWZ2 237 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 HAGHLQ6PII5 290 aaPredicted RBP7.12□□□□□ -1.27
CNOT1-216ENST00000569240 SZRD1Q7Z422 152 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 METTL25Q8N6Q8 603 aa7.12□□□□□ -1.27
CNOT1-216ENST00000569240 ZFP28Q8NHY6 868 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms