RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 MID2Q9UJV3 735 aa17.18■□□□□ 0.34
VAC14-210ENST00000568548 CROTQ9UKG9 612 aa17.18■□□□□ 0.34
VAC14-210ENST00000568548 ANKRD6Q9Y2G4 727 aa17.18■□□□□ 0.34
VAC14-210ENST00000568548 TRPC5OSA6NMA1 111 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 B4GAT1O43505 415 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 H2AFYO75367 372 aaKnown RBP17.17■□□□□ 0.34
VAC14-210ENST00000568548 H6PDO95479 791 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 LPIN1Q14693 890 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 TBCELQ5QJ74 424 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 KLC3Q6P597 504 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 TTC33Q6PID6 262 aaPredicted RBP17.17■□□□□ 0.34
VAC14-210ENST00000568548 SCN4BQ8IWT1 228 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 SEPHS2Q99611 448 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 RRN3Q9NYV6 651 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 BOLA2-SMG1P6H3BVE0 249 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 WARSP23381 471 aaKnown RBP17.17■□□□□ 0.34
VAC14-210ENST00000568548 SH3BP2P78314 561 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 SLC10A7Q0GE19 358 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 STX5Q13190 355 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 APOFQ13790 326 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 MFSD10Q14728 455 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 RABL3Q5HYI8 236 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 PIWIL4Q7Z3Z4 852 aaKnown RBP17.17■□□□□ 0.34
VAC14-210ENST00000568548 SETD3Q86TU7 594 aaPredicted RBP17.17■□□□□ 0.34
VAC14-210ENST00000568548 PELI3Q8N2H9 469 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 TRPC4APQ8TEL6 797 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 CASP10Q92851 521 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 PTERQ96BW5 349 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 ERI2A8K979 691 aaKnown RBP17.17■□□□□ 0.34
VAC14-210ENST00000568548 UBXN8O00124 270 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 NCAM2O15394 837 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 SRP72O76094 671 aaKnown RBP17.17■□□□□ 0.34
VAC14-210ENST00000568548 TBX18O95935 607 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 ITGB1P05556 798 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 SCNN1AP37088 669 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 ARL1P40616 181 aaPredicted RBP17.17■□□□□ 0.34
VAC14-210ENST00000568548 PNPLA4P41247 253 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 DIO3P55073 304 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 NEDD8Q15843 81 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 ZIK1Q3SY52 487 aaPredicted RBP17.17■□□□□ 0.34
VAC14-210ENST00000568548 TRIM74Q86UV6 250 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 TRIM73Q86UV7 250 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 DDI1Q8WTU0 396 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 NAA50Q9GZZ1 169 aaKnown RBP17.17■□□□□ 0.34
VAC14-210ENST00000568548 MID1IP1Q9NPA3 183 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 SMOXQ9NWM0 555 aa17.17■□□□□ 0.34
VAC14-210ENST00000568548 NME4O00746 187 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 HAPLN1P10915 354 aaPredicted RBP17.16■□□□□ 0.34
VAC14-210ENST00000568548 CCR1P32246 355 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 CCR3P51677 355 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 TECRLQ5HYJ1 363 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 HECTD2Q5U5R9 776 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 GPR107Q5VW38 600 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 TMEM74Q96NL1 305 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 FAM50BQ9Y247 325 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 AAR2Q9Y312 384 aaKnown RBP17.16■□□□□ 0.34
VAC14-210ENST00000568548 A0A0J9YYE9 177 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 INPP4BO15327 924 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 BAIAP3O94812 1187 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 XKR5Q6UX68 686 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 LINC00523Q86TU6 105 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 RDH11Q8TC12 318 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 BLOC1S5Q8TDH9 187 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 KCTD13Q8WZ19 329 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 DLG3Q92796 817 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 TBATAQ96M53 351 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 SLC2A11Q9BYW1 496 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 DNAI2Q9GZS0 605 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 LTB4R2Q9NPC1 389 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 SEMA4BQ9NPR2 832 aaPredicted RBP17.16■□□□□ 0.34
VAC14-210ENST00000568548 CNGB3Q9NQW8 809 aa17.16■□□□□ 0.34
VAC14-210ENST00000568548 DUS2Q9NX74 493 aaKnown RBP17.16■□□□□ 0.34
VAC14-210ENST00000568548 IPO11Q9UI26 975 aaKnown RBP17.16■□□□□ 0.34
VAC14-210ENST00000568548 MANSC4A6NHS7 340 aaPredicted RBP17.15■□□□□ 0.34
VAC14-210ENST00000568548 HHLA1C9JL84 531 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 GIPC1O14908 333 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 KPNA6O60684 536 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 CNTN5O94779 1100 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 NR4A1P22736 598 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 PPP1R8Q12972 351 aaKnown RBP17.15■□□□□ 0.34
VAC14-210ENST00000568548 RPS6KA2Q15349 733 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 UGP2Q16851 508 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 OTUD3Q5T2D3 398 aaPredicted RBP17.15■□□□□ 0.34
VAC14-210ENST00000568548 FIBCD1Q8N539 461 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 TOP6BLQ8N6T0 577 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 NTAN1Q96AB6 310 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 TUBGCP3Q96CW5 907 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 HAUS8Q9BT25 410 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 C1orf50Q9BV19 199 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 OAZ3Q9UMX2 235 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 SMIM35A0A1B0GVV1 85 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 MBLAC1A4D2B0 266 aaPredicted RBP17.15■□□□□ 0.34
VAC14-210ENST00000568548 SLCO1B7G3V0H7 640 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 PIP5K1BO14986 540 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 CAPN3P20807 821 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 SLC5A3P53794 718 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 PTPRRQ15256 657 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 AAK1Q2M2I8 961 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 POTEHQ6S545 545 aa17.15■□□□□ 0.34
VAC14-210ENST00000568548 PTGR2Q8N8N7 351 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms