RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 E5RI56 91 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 RECQL5O94762 991 aaPredicted RBP10.93□□□□□ -0.66
PALB2-206ENST00000568219 MTHFRP42898 656 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 EMP3P54852 163 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 PPIL2Q13356 520 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 SYT16Q17RD7 645 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 R3HCC1LQ7Z5L2 792 aaKnown RBP10.93□□□□□ -0.66
PALB2-206ENST00000568219 PIGZQ86VD9 579 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 SCN4BQ8IWT1 228 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 UBE2J2Q8N2K1 259 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 ULK4Q96C45 1275 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 TNIP3Q96KP6 325 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 NODALQ96S42 347 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 RGS18Q9NS28 235 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 HOXC10Q9NYD6 342 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 PRSS51A0A1B0GVH4 220 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 HACD1B0YJ81 288 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 ARHGEF9O43307 516 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 GRID2O43424 1007 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 SERPINB7O75635 380 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 APBA3O96018 575 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 THRBP10828 461 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 GLDCP23378 1020 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 MAXP61244 160 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 POU4F1Q01851 419 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 BST2Q10589 180 aaKnown RBP10.93□□□□□ -0.66
PALB2-206ENST00000568219 SOWAHAQ2M3V2 549 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 ARMC4Q5T2S8 1044 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 CENPLQ8N0S6 344 aaPredicted RBP10.93□□□□□ -0.66
PALB2-206ENST00000568219 SPON2Q9BUD6 331 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 WDR12Q9GZL7 423 aaKnown RBP10.93□□□□□ -0.66
PALB2-206ENST00000568219 SMURF2Q9HAU4 748 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 SUCOQ9UBS9 1254 aaKnown RBP10.93□□□□□ -0.66
PALB2-206ENST00000568219 CPSF3Q9UKF6 684 aaKnown RBP10.93□□□□□ -0.66
PALB2-206ENST00000568219 PDE10AQ9Y233 779 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 TRIM64CA6NLI5 447 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 NOTOA8MTQ0 251 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 G3V2L1 256 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 ARPC2O15144 300 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 BMP10O95393 424 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 LTA4HP09960 611 aaKnown RBP10.93□□□□□ -0.66
PALB2-206ENST00000568219 CCR1P32246 355 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 CHRNA4P43681 627 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 IST1P53990 364 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 ARPC4P59998 168 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 FPGSQ05932 587 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 LAPTM4AQ15012 233 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 TRIP4Q15650 581 aaPredicted RBP10.93□□□□□ -0.66
PALB2-206ENST00000568219 PAN2Q504Q3 1202 aaKnown RBP10.93□□□□□ -0.66
PALB2-206ENST00000568219 DCAF15Q66K64 600 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 TFAP2DQ7Z6R9 452 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 COPS5Q92905 334 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 ABCG8Q9H221 673 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 DPEP3Q9H4B8 488 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 NT5MQ9NPB1 228 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 COMMD8Q9NX08 183 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 ZMYM5Q9UJ78 669 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 MAGED1Q9Y5V3 778 aaPredicted RBP10.93□□□□□ -0.66
PALB2-206ENST00000568219 PMF1-BGLAPU3KQ54 211 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 DCCP43146 1447 aa10.93□□□□□ -0.66
PALB2-206ENST00000568219 G3V2T6 193 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 SDHDO14521 159 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 HOXC6P09630 235 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 IL12AP29459 219 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 CCT8P50990 548 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 FAM219BQ5XKK7 198 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 CMTR2Q8IYT2 770 aaKnown RBP10.92□□□□□ -0.66
PALB2-206ENST00000568219 TMEM102Q8N9M5 508 aaPredicted RBP10.92□□□□□ -0.66
PALB2-206ENST00000568219 FAM110BQ8TC76 370 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 AKT1S1Q96B36 256 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 ZNF597Q96LX8 424 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 NPLQ9BXD5 320 aaPredicted RBP10.92□□□□□ -0.66
PALB2-206ENST00000568219 SLC38A7Q9NVC3 462 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 OR12D3Q9UGF7 316 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 SATB2Q9UPW6 733 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 AAR2Q9Y312 384 aaKnown RBP10.92□□□□□ -0.66
PALB2-206ENST00000568219 XPNPEP2O43895 674 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 PGLSO95336 258 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 CAPN1P07384 714 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 HMBSP08397 361 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 UBA1P22314 1058 aaKnown RBP10.92□□□□□ -0.66
PALB2-206ENST00000568219 NDUFV1P49821 464 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 MTPNP58546 118 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 CCNA1P78396 465 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 SP2Q02086 613 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 HSDL1Q3SXM5 330 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 COLEC12Q5KU26 742 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 NCBP2-AS2Q69YL0 99 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 PPP4R4Q6NUP7 873 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 LCLAT1Q6UWP7 414 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 GCNT7Q6ZNI0 430 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 SAMD7Q7Z3H4 446 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 TBC1D21Q8IYX1 336 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 TTC39CQ8N584 583 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 CDYL2Q8N8U2 506 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 TBC1D15Q8TC07 691 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 FAR1Q8WVX9 515 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 PROX1Q92786 737 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 TMEM134Q9H6X4 195 aa10.92□□□□□ -0.66
PALB2-206ENST00000568219 ZC4H2Q9NQZ6 224 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms