RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 LOC400499M0QZD8 3231 aa18.67■□□□□ 0.58
LINC01238-205ENST00000567549 CDRT15L2A8MXV6 281 aa18.67■□□□□ 0.58
LINC01238-205ENST00000567549 D6RAR5 112 aa18.67■□□□□ 0.58
LINC01238-205ENST00000567549 ATMINO43313 823 aaPredicted RBP18.67■□□□□ 0.58
LINC01238-205ENST00000567549 LRCH4O75427 683 aa18.67■□□□□ 0.58
LINC01238-205ENST00000567549 TRIM23P36406 574 aa18.67■□□□□ 0.58
LINC01238-205ENST00000567549 ZNF165P49910 485 aa18.67■□□□□ 0.58
LINC01238-205ENST00000567549 CDH6P55285 790 aa18.67■□□□□ 0.58
LINC01238-205ENST00000567549 DPYSL2Q16555 572 aa18.67■□□□□ 0.58
LINC01238-205ENST00000567549 TDRD12Q587J7 1177 aaKnown RBP18.67■□□□□ 0.58
LINC01238-205ENST00000567549 FIGNQ5HY92 759 aa18.67■□□□□ 0.58
LINC01238-205ENST00000567549 FBXO39Q8N4B4 442 aa18.67■□□□□ 0.58
LINC01238-205ENST00000567549 ATPAF2Q8N5M1 289 aa18.67■□□□□ 0.58
LINC01238-205ENST00000567549 NUS1Q96E22 293 aa18.67■□□□□ 0.58
LINC01238-205ENST00000567549 HSD3B7Q9H2F3 369 aa18.67■□□□□ 0.58
LINC01238-205ENST00000567549 EPB41L5Q9HCM4 733 aa18.67■□□□□ 0.58
LINC01238-205ENST00000567549 CWC15Q9P013 229 aaKnown RBP18.67■□□□□ 0.58
LINC01238-205ENST00000567549 APPL1Q9UKG1 709 aa18.67■□□□□ 0.58
LINC01238-205ENST00000567549 DNPEPQ9ULA0 475 aa18.67■□□□□ 0.58
LINC01238-205ENST00000567549 PCDHGA7Q9Y5G6 932 aa18.67■□□□□ 0.58
LINC01238-205ENST00000567549 LRP4O75096 1905 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 PSMD11O00231 422 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 TEX33O43247 280 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 CPP00450 1065 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 RPLP0P05388 317 aaKnown RBP18.66■□□□□ 0.58
LINC01238-205ENST00000567549 JMJD7P0C870 316 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 MYCLP1P12525 358 aaPredicted RBP18.66■□□□□ 0.58
LINC01238-205ENST00000567549 CCKBRP32239 447 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 ILF3Q12906 894 aaKnown RBP eCLIP18.66■□□□□ 0.58
LINC01238-205ENST00000567549 BIRC2Q13490 618 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 DPYSQ14117 519 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 CLPPQ16740 277 aaPredicted RBP18.66■□□□□ 0.58
LINC01238-205ENST00000567549 CA9Q16790 459 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 ARHGAP40Q5TG30 622 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 USP45Q70EL2 814 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 RAB11FIP2Q7L804 512 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 ZNF571Q7Z3V5 609 aaPredicted RBP18.66■□□□□ 0.58
LINC01238-205ENST00000567549 CCNJLQ8IV13 435 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 ARHGAP12Q8IWW6 846 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 FAM46DQ8NEK8 389 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 SNRNP27Q8WVK2 155 aaKnown RBP18.66■□□□□ 0.58
LINC01238-205ENST00000567549 TEKT4Q8WW24 435 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 NUDCD1Q96RS6 583 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 GSDMCQ9BYG8 508 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 LRRN3Q9H3W5 708 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 SEPT10Q9P0V9 454 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 RCOR3Q9P2K3 495 aaPredicted RBP18.66■□□□□ 0.58
LINC01238-205ENST00000567549 MYO1AQ9UBC5 1043 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 IP6K2Q9UHH9 426 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 MOSPD1Q9UJG1 213 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 PHTF1Q9UMS5 762 aa18.66■□□□□ 0.58
LINC01238-205ENST00000567549 A0A1B0GTH6 734 aa18.65■□□□□ 0.58
LINC01238-205ENST00000567549 TRAFD1O14545 582 aaPredicted RBP18.65■□□□□ 0.58
LINC01238-205ENST00000567549 NUDT21O43809 227 aaKnown RBP18.65■□□□□ 0.58
LINC01238-205ENST00000567549 PYGLP06737 847 aa18.65■□□□□ 0.58
LINC01238-205ENST00000567549 CA4P22748 312 aa18.65■□□□□ 0.58
LINC01238-205ENST00000567549 CES1P23141 567 aa18.65■□□□□ 0.58
LINC01238-205ENST00000567549 VIPR1P32241 457 aa18.65■□□□□ 0.58
LINC01238-205ENST00000567549 RALGDSQ12967 914 aa18.65■□□□□ 0.58
LINC01238-205ENST00000567549 HADHQ16836 314 aaKnown RBP18.65■□□□□ 0.58
LINC01238-205ENST00000567549 C14orf28Q4W4Y0 310 aa18.65■□□□□ 0.58
LINC01238-205ENST00000567549 MARC1Q5VT66 337 aa18.65■□□□□ 0.58
LINC01238-205ENST00000567549 PNCKQ6P2M8 343 aa18.65■□□□□ 0.58
LINC01238-205ENST00000567549 CCDC81Q6ZN84 652 aa18.65■□□□□ 0.58
LINC01238-205ENST00000567549 ZNF605Q86T29 641 aa18.65■□□□□ 0.58
LINC01238-205ENST00000567549 GPR156Q8NFN8 814 aa18.65■□□□□ 0.58
LINC01238-205ENST00000567549 PDCD6IPQ8WUM4 868 aaKnown RBP18.65■□□□□ 0.58
LINC01238-205ENST00000567549 FUBP1Q96AE4 644 aaKnown RBP18.65■□□□□ 0.58
LINC01238-205ENST00000567549 PDXPQ96GD0 296 aa18.65■□□□□ 0.58
LINC01238-205ENST00000567549 PEBP4Q96S96 227 aa18.65■□□□□ 0.58
LINC01238-205ENST00000567549 CMKLR1Q99788 373 aa18.65■□□□□ 0.58
LINC01238-205ENST00000567549 ISCUQ9H1K1 167 aa18.65■□□□□ 0.58
LINC01238-205ENST00000567549 DPEP2Q9H4A9 486 aa18.65■□□□□ 0.58
LINC01238-205ENST00000567549 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.65■□□□□ 0.58
LINC01238-205ENST00000567549 LCMT1Q9UIC8 334 aa18.65■□□□□ 0.58
LINC01238-205ENST00000567549 PNMA8BQ9ULN7 279 aaPredicted RBP18.65■□□□□ 0.58
LINC01238-205ENST00000567549 PRSS38A1L453 326 aa18.64■□□□□ 0.57
LINC01238-205ENST00000567549 TEAD1P28347 426 aa18.64■□□□□ 0.57
LINC01238-205ENST00000567549 RGRP47804 291 aa18.64■□□□□ 0.57
LINC01238-205ENST00000567549 SKOR1P84550 965 aa18.64■□□□□ 0.57
LINC01238-205ENST00000567549 CFHR1Q03591 330 aa18.64■□□□□ 0.57
LINC01238-205ENST00000567549 CERCAMQ5T4B2 595 aa18.64■□□□□ 0.57
LINC01238-205ENST00000567549 TMEM164Q5U3C3 297 aa18.64■□□□□ 0.57
LINC01238-205ENST00000567549 OGFOD3Q6PK18 319 aa18.64■□□□□ 0.57
LINC01238-205ENST00000567549 ZSWIM9Q86XI8 627 aa18.64■□□□□ 0.57
LINC01238-205ENST00000567549 JAMLQ86YT9 394 aa18.64■□□□□ 0.57
LINC01238-205ENST00000567549 NPWQ8N729 165 aa18.64■□□□□ 0.57
LINC01238-205ENST00000567549 HSPH1Q92598 858 aa18.64■□□□□ 0.57
LINC01238-205ENST00000567549 SYN2Q92777 582 aaPredicted RBP18.64■□□□□ 0.57
LINC01238-205ENST00000567549 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.64■□□□□ 0.57
LINC01238-205ENST00000567549 CYP4F12Q9HCS2 524 aa18.64■□□□□ 0.57
LINC01238-205ENST00000567549 B4GALT6Q9UBX8 382 aa18.64■□□□□ 0.57
LINC01238-205ENST00000567549 DDX3XO00571 662 aaKnown RBP eCLIP18.63■□□□□ 0.57
LINC01238-205ENST00000567549 HTRA2O43464 458 aaPredicted RBP18.63■□□□□ 0.57
LINC01238-205ENST00000567549 MMP13P45452 471 aa18.63■□□□□ 0.57
LINC01238-205ENST00000567549 CCL7P80098 99 aa18.63■□□□□ 0.57
LINC01238-205ENST00000567549 SLC10A7Q0GE19 358 aa18.63■□□□□ 0.57
LINC01238-205ENST00000567549 KRT81Q14533 505 aa18.63■□□□□ 0.57
LINC01238-205ENST00000567549 ARMC12Q5T9G4 340 aa18.63■□□□□ 0.57
LINC01238-205ENST00000567549 TIGD7Q6NT04 549 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms