RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 NOA1Q8NC60 698 aaKnown RBP8.19□□□□□ -1.1
CDH13-208ENST00000566333 LRRN4CLQ8ND94 238 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 CADM4Q8NFZ8 388 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 C1orf216Q8TAB5 229 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 CPT1BQ92523 772 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 IFT43Q96FT9 208 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 SCRN2Q96FV2 425 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 WRAP53Q9BUR4 548 aaKnown RBP8.19□□□□□ -1.1
CDH13-208ENST00000566333 C1QTNF2Q9BXJ5 285 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 FSD1LQ9BXM9 530 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 L2HGDHQ9H9P8 463 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 SMG5Q9UPR3 1016 aaKnown RBP8.19□□□□□ -1.1
CDH13-208ENST00000566333 COQ6Q9Y2Z9 468 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 AAR2Q9Y312 384 aaKnown RBP8.19□□□□□ -1.1
CDH13-208ENST00000566333 HCN4Q9Y3Q4 1203 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 ZNF711Q9Y462 761 aa8.19□□□□□ -1.1
CDH13-208ENST00000566333 ARIH1Q9Y4X5 557 aaPredicted RBP8.19□□□□□ -1.1
CDH13-208ENST00000566333 ATXN2Q99700 1313 aaKnown RBP8.19□□□□□ -1.1
CDH13-208ENST00000566333 ASCC3Q8N3C0 2202 aaKnown RBP8.19□□□□□ -1.1
CDH13-208ENST00000566333 TBC1D3DA0A087WVF3 549 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 TBC1D3IA0A087WXS9 549 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 TBC1D3EA0A087X179 549 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 TBC1D3KA0A087X1G2 549 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 TBC1D3FA6NER0 549 aaPredicted RBP8.18□□□□□ -1.1
CDH13-208ENST00000566333 IGLON5A6NGN9 336 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 ERI2A8K979 691 aaKnown RBP8.18□□□□□ -1.1
CDH13-208ENST00000566333 A8MX80 341 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 TBC1D3LB9A6J9 549 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 WNT9AO14904 365 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 AURKAO14965 403 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 RAD51BO15315 384 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 MMP20O60882 483 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 NDUFS2O75306 463 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 PCDH8O95206 1070 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 APRTP07741 180 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 ELFN1P0C7U0 828 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 TBC1D3HP0C7X1 549 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 ZNF30P17039 623 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 TPSB2P20231 275 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 XPAP23025 273 aaPredicted RBP8.18□□□□□ -1.1
CDH13-208ENST00000566333 ITPKAP23677 461 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 MAT2AP31153 395 aaKnown RBP8.18□□□□□ -1.1
CDH13-208ENST00000566333 LIG3P49916 1009 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 STC1P52823 247 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 EPHB1P54762 984 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 POLR2LP62875 67 aaKnown RBP8.18□□□□□ -1.1
CDH13-208ENST00000566333 FAM193AP78312 1265 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 BASP1P80723 227 aaKnown RBP8.18□□□□□ -1.1
CDH13-208ENST00000566333 CREB5Q02930 508 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 CCDC15Q0P6D6 951 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 TUBB2AQ13885 445 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 DHX34Q14147 1143 aaKnown RBP8.18□□□□□ -1.1
CDH13-208ENST00000566333 SIM2Q14190 667 aaPredicted RBP8.18□□□□□ -1.1
CDH13-208ENST00000566333 PRPSAP1Q14558 356 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 AGERQ15109 404 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 PPP1R7Q15435 360 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 TPSAB1Q15661 275 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 LPAL2Q16609 132 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 RNASEH2BQ5TBB1 312 aaKnown RBP8.18□□□□□ -1.1
CDH13-208ENST00000566333 LYSMD4Q5XG99 296 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 TBC1D3GQ6DHY5 549 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 TBC1D3CQ6IPX1 549 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 NAPEPLDQ6IQ20 393 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 C4orf22Q6V702 233 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 KDM7AQ6ZMT4 941 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 PRR23BQ6ZRT6 265 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 RFLNAQ6ZTI6 216 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 CEP68Q76N32 757 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 LPCAT2Q7L5N7 544 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 HSD11B1LQ7Z5J1 315 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 TBC1D3Q8IZP1 549 aaPredicted RBP8.18□□□□□ -1.1
CDH13-208ENST00000566333 PELI3Q8N2H9 469 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 CBARPQ8N350 705 aaPredicted RBP8.18□□□□□ -1.1
CDH13-208ENST00000566333 SLC25A41Q8N5S1 370 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 TMEM145Q8NBT3 493 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 CXorf40AQ8TE69 158 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 DNASE2BQ8WZ79 361 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 ATOH1Q92858 354 aaPredicted RBP8.18□□□□□ -1.1
CDH13-208ENST00000566333 KLK6Q92876 244 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 FOXJ1Q92949 421 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 RMDN1Q96DB5 314 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 COQ10AQ96MF6 247 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 RUNDC3BQ96NL0 473 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 PHOX2BQ99453 314 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 KLF6Q99612 283 aaPredicted RBP8.18□□□□□ -1.1
CDH13-208ENST00000566333 TUBB2BQ9BVA1 445 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 ADGRE3Q9BY15 652 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 ARNT2Q9HBZ2 717 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 FZD3Q9NPG1 666 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 CASS4Q9NQ75 786 aa8.18□□□□□ -1.1
CDH13-208ENST00000566333 PIH1D1Q9NWS0 290 aaKnown RBP8.18□□□□□ -1.1
CDH13-208ENST00000566333 ARHGEF17Q96PE2 2063 aaPredicted RBP8.18□□□□□ -1.1
CDH13-208ENST00000566333 GOLGA4Q13439 2230 aaKnown RBP8.17□□□□□ -1.1
CDH13-208ENST00000566333 C1orf232A0A0U1RR37 186 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 A0A1W2PPC4 97 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 GOLGA6CA6NDK9 693 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 GOLGA6BA6NDN3 693 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 MEI4A8MW99 385 aa8.17□□□□□ -1.1
CDH13-208ENST00000566333 BHMG1C9JSJ3 638 aaPredicted RBP8.17□□□□□ -1.1
CDH13-208ENST00000566333 PROB1E7EW31 1015 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms