RNA–Protein interactions for RNA: ENST00000566215.5

UBE3A-205, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE3A, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-205ENST00000566215 VPS4AQ9UN37 437 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 ATP8A1Q9Y2Q0 1164 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 URB1O60287 2271 aaKnown RBP6.14□□□□□ -1.43
UBE3A-205ENST00000566215 BICDL2A1A5D9 508 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 PMS2P1A4D2B8 440 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 TRAFD1O14545 582 aaPredicted RBP6.14□□□□□ -1.43
UBE3A-205ENST00000566215 MUSKO15146 869 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 SMAD6O43541 496 aaKnown RBP6.14□□□□□ -1.43
UBE3A-205ENST00000566215 CTSEP14091 401 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 PRLRP16471 622 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 POU3F2P20265 443 aaPredicted RBP6.14□□□□□ -1.43
UBE3A-205ENST00000566215 OAS2P29728 719 aaKnown RBP6.14□□□□□ -1.43
UBE3A-205ENST00000566215 MTFR2Q6P444 385 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 TRIM72Q6ZMU5 477 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 TMPRSS9Q7Z410 1059 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 DEFB106AQ8N104 65 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 CFAP52Q8N1V2 620 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 TTC16Q8NEE8 873 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 CLEC4CQ8WTT0 213 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 ABHD17AQ96GS6 310 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 KREMEN1Q96MU8 473 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 DHRS4Q9BTZ2 278 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 WDCPQ9H6R7 721 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 RAD18Q9NS91 495 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 PCDHB4Q9Y5E5 795 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 E5RJQ4 531 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 PCDH17O14917 1159 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 CBX6O95503 412 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 CLDN1O95832 211 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 ATP1A3P13637 1013 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 MAT2AP31153 395 aaKnown RBP6.14□□□□□ -1.43
UBE3A-205ENST00000566215 UBE2IP63279 158 aaKnown RBP6.14□□□□□ -1.43
UBE3A-205ENST00000566215 CYP4F2P78329 520 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 SKIDA1Q1XH10 827 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 DENND1BQ6P3S1 775 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 MED25Q71SY5 747 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 LZTR1Q8N653 840 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 RTL3Q8N8U3 475 aaKnown RBP6.14□□□□□ -1.43
UBE3A-205ENST00000566215 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.14□□□□□ -1.43
UBE3A-205ENST00000566215 UBA3Q8TBC4 463 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 BHMTQ93088 406 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 LRRC19Q9H756 370 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 GPN2Q9H9Y4 310 aaPredicted RBP6.14□□□□□ -1.43
UBE3A-205ENST00000566215 SAMSN1Q9NSI8 373 aaKnown RBP6.14□□□□□ -1.43
UBE3A-205ENST00000566215 DDIT4Q9NX09 232 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 SLC39A1Q9NY26 324 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 XPO7Q9UIA9 1087 aaKnown RBP6.14□□□□□ -1.43
UBE3A-205ENST00000566215 MKL2Q9ULH7 1088 aa6.14□□□□□ -1.43
UBE3A-205ENST00000566215 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.14□□□□□ -1.43
UBE3A-205ENST00000566215 DOCK9Q9BZ29 2069 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 CPAMD8Q8IZJ3 1885 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 WDFY3Q8IZQ1 3526 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 LOC101059948A0A1B0GTJ6 334 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 VPS37CA5D8V6 355 aaPredicted RBP6.13□□□□□ -1.43
UBE3A-205ENST00000566215 FAM47DPA6NHR8 397 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 PAK4O96013 591 aaPredicted RBP6.13□□□□□ -1.43
UBE3A-205ENST00000566215 PFKFB1P16118 471 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 CSTF2P33240 577 aaKnown RBP eCLIP6.13□□□□□ -1.43
UBE3A-205ENST00000566215 DCDC1P59894 354 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 FOXD4L6Q3SYB3 417 aaPredicted RBP6.13□□□□□ -1.43
UBE3A-205ENST00000566215 ALFQ53S48 1182 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 DPY19L2P1Q6NXN4 242 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 TMEM270Q6UE05 265 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 FOXD4L3Q6VB84 417 aaPredicted RBP6.13□□□□□ -1.43
UBE3A-205ENST00000566215 OR10G6Q8NH81 332 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 UBXN4Q92575 508 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 TBC1D31Q96DN5 1066 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 CTRCQ99895 268 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 SUV39H2Q9H5I1 410 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 MBNL1Q9NR56 388 aaKnown RBP6.13□□□□□ -1.43
UBE3A-205ENST00000566215 PHPT1Q9NRX4 125 aaPredicted RBP6.13□□□□□ -1.43
UBE3A-205ENST00000566215 PIGVQ9NUD9 493 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 HPCAL4Q9UM19 191 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 ADGRG1Q9Y653 693 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 DNMT3AQ9Y6K1 912 aaPredicted RBP6.13□□□□□ -1.43
UBE3A-205ENST00000566215 ASPMQ8IZT6 3477 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 APC2O95996 2303 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 CEACAM5P06731 702 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 CSF2RBP32927 897 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 TSFMP43897 325 aaKnown RBP6.13□□□□□ -1.43
UBE3A-205ENST00000566215 PGDP52209 483 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 DMPKQ09013 629 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 CHRNA6Q15825 494 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 UGP2Q16851 508 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 ZRANB3Q5FWF4 1079 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 PRAMEF14Q5SWL7 426 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 C6orf15Q6UXA7 325 aaPredicted RBP6.13□□□□□ -1.43
UBE3A-205ENST00000566215 MMS22LQ6ZRQ5 1243 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 ASB18Q6ZVZ8 466 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 TECPR1Q7Z6L1 1165 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 JAMLQ86YT9 394 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 FAM71AQ8IYT1 594 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 ZDHHC1Q8WTX9 485 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 OR1E3Q8WZA6 343 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 STARD8Q92502 1023 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 SRPK1Q96SB4 655 aaKnown RBP6.13□□□□□ -1.43
UBE3A-205ENST00000566215 TCEAL2Q9H3H9 227 aaPredicted RBP6.13□□□□□ -1.43
UBE3A-205ENST00000566215 ATP13A1Q9HD20 1204 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 CA5BQ9Y2D0 317 aa6.13□□□□□ -1.43
UBE3A-205ENST00000566215 CEP83Q9Y592 693 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms