RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 PARP15Q460N3 678 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 PHF19Q5T6S3 580 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 AFMIDQ63HM1 303 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 ERAP2Q6P179 960 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 LIPIQ6XZB0 460 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 NOP9Q86U38 636 aaKnown RBP12.81□□□□□ -0.36
RNF40-208ENST00000565995 ZSWIM9Q86XI8 627 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 ZNF677Q86XU0 584 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 CCDC185Q8N715 623 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 KIAA1524Q8TCG1 905 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 CPA5Q8WXQ8 436 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 ECHDC3Q96DC8 303 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 PSMG3-AS1Q96PY0 264 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 DDA1Q9BW61 102 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 DPEP2Q9H4A9 486 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 PDFQ9HBH1 243 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 MRPL40Q9NQ50 206 aaKnown RBP12.81□□□□□ -0.36
RNF40-208ENST00000565995 METTL5Q9NRN9 209 aaKnown RBP12.81□□□□□ -0.36
RNF40-208ENST00000565995 SPATS2LQ9NUQ6 558 aaKnown RBP12.81□□□□□ -0.36
RNF40-208ENST00000565995 KIAA1468Q9P260 1216 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 ATP8A1Q9Y2Q0 1164 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 CRYBG3Q68DQ2 2970 aa12.81□□□□□ -0.36
RNF40-208ENST00000565995 RP1L1Q8IWN7 2480 aaPredicted RBP12.8□□□□□ -0.36
RNF40-208ENST00000565995 MYO9AB2RTY4 2548 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 RASA4BC9J798 803 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 RASA4O43374 803 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 MMEP08473 750 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 CCNB1P14635 433 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 LIFP15018 202 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 UGT1A3P35503 534 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 CCR10P46092 362 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 GSCP56915 257 aaPredicted RBP12.8□□□□□ -0.36
RNF40-208ENST00000565995 OR1D5P58170 312 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 MAN2A1Q16706 1144 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 CDO1Q16878 200 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 SKIDA1Q1XH10 827 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 MIIPQ5JXC2 388 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 KLHDC7AQ5VTJ3 777 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 RBM43Q6ZSC3 357 aaKnown RBP12.8□□□□□ -0.36
RNF40-208ENST00000565995 PTRH1Q86Y79 214 aaKnown RBP12.8□□□□□ -0.36
RNF40-208ENST00000565995 NRROSQ86YC3 692 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 OR4D9Q8NGE8 314 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 CCL4L1Q8NHW4 92 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 EPS8L1Q8TE68 723 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 SPOCK2Q92563 424 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 SLC45A3Q96JT2 553 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 DPYSL5Q9BPU6 564 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 LGR4Q9BXB1 951 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 ASPSCR1Q9BZE9 553 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 NDST4Q9H3R1 872 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 RDH14Q9HBH5 336 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 TRNAU1APQ9NX07 287 aaKnown RBP12.8□□□□□ -0.36
RNF40-208ENST00000565995 PDP2Q9P2J9 529 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 MAN2B2Q9Y2E5 1009 aa12.8□□□□□ -0.36
RNF40-208ENST00000565995 PRSS38A1L453 326 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 B4DGG1 531 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 B4E171 279 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 PDE2AO00408 941 aaPredicted RBP12.79□□□□□ -0.36
RNF40-208ENST00000565995 RECQL5O94762 991 aaPredicted RBP12.79□□□□□ -0.36
RNF40-208ENST00000565995 FUCA1P04066 466 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 PCCBP05166 539 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 TSPAN7P41732 249 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 MTIF2P46199 727 aaKnown RBP12.79□□□□□ -0.36
RNF40-208ENST00000565995 NSUN2Q08J23 767 aaKnown RBP eCLIP12.79□□□□□ -0.36
RNF40-208ENST00000565995 IGFBP7Q16270 282 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 STX1AQ16623 288 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 MAP9Q49MG5 647 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 CRTC2Q53ET0 693 aaPredicted RBP12.79□□□□□ -0.36
RNF40-208ENST00000565995 TAF3Q5VWG9 929 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 PNCKQ6P2M8 343 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 SLFN11Q7Z7L1 901 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 CAMK1DQ8IU85 385 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 CREBRFQ8IUR6 639 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 CBARPQ8N350 705 aaPredicted RBP12.79□□□□□ -0.36
RNF40-208ENST00000565995 NETO2Q8NC67 525 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 JOSD2Q8TAC2 188 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 FAM172AQ8WUF8 416 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 PMEPA1Q969W9 287 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 NCAPGQ9BPX3 1015 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 NUDT22Q9BRQ3 303 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 LRRC19Q9H756 370 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 CYP4F12Q9HCS2 524 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 KCTD5Q9NXV2 234 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 UBA2Q9UBT2 640 aaPredicted RBP12.79□□□□□ -0.36
RNF40-208ENST00000565995 NOCTQ9UK39 431 aaKnown RBP12.79□□□□□ -0.36
RNF40-208ENST00000565995 PILRAQ9UKJ1 303 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 FHOD1Q9Y613 1164 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 TNRC6AQ8NDV7 1962 aaKnown RBP12.79□□□□□ -0.36
RNF40-208ENST00000565995 SHANK1Q9Y566 2161 aa12.79□□□□□ -0.36
RNF40-208ENST00000565995 ZNF891A8MT65 544 aaPredicted RBP12.78□□□□□ -0.36
RNF40-208ENST00000565995 THRAP10827 490 aa12.78□□□□□ -0.36
RNF40-208ENST00000565995 MYCLP1P12525 358 aaPredicted RBP12.78□□□□□ -0.36
RNF40-208ENST00000565995 UCHL3P15374 230 aa12.78□□□□□ -0.36
RNF40-208ENST00000565995 EPHB2P29323 1055 aa12.78□□□□□ -0.36
RNF40-208ENST00000565995 CD97P48960 835 aa12.78□□□□□ -0.36
RNF40-208ENST00000565995 AIF1P55008 147 aa12.78□□□□□ -0.36
RNF40-208ENST00000565995 POLR2LP62875 67 aaKnown RBP12.78□□□□□ -0.36
RNF40-208ENST00000565995 TYRO3Q06418 890 aa12.78□□□□□ -0.36
RNF40-208ENST00000565995 PTP4A2Q12974 167 aa12.78□□□□□ -0.36
RNF40-208ENST00000565995 RAPGEF1Q13905 1077 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms