RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 NDST3O95803 873 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 TRBC1P01850 177 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 NUDT17P0C025 328 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 ITIH2P19823 946 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 CD6P30203 668 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 HSD17B3P37058 310 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 MDH1P40925 334 aaKnown RBP12.67□□□□□ -0.38
SF3B3-206ENST00000565990 ABL2P42684 1182 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 GRIA4P48058 902 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 ADPRHP54922 357 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 CDK16Q00536 496 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 CREB5Q02930 508 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 GPS1Q13098 491 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 QPCTQ16769 361 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 KCTD19Q17RG1 926 aaPredicted RBP12.67□□□□□ -0.38
SF3B3-206ENST00000565990 SIRPB2Q5JXA9 342 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 JAMLQ86YT9 394 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 RAVER1Q8IY67 606 aaKnown RBP12.67□□□□□ -0.38
SF3B3-206ENST00000565990 NDUFAF2Q8N183 169 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 GAB3Q8WWW8 586 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 RLN3Q8WXF3 142 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 IFT43Q96FT9 208 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 TOE1Q96GM8 510 aaKnown RBP12.67□□□□□ -0.38
SF3B3-206ENST00000565990 TMEM109Q9BVC6 243 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 TPSD1Q9BZJ3 242 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 BTBD1Q9H0C5 482 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 PCED1AQ9H1Q7 454 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 KCNH6Q9H252 994 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 LRRC40Q9H9A6 602 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 MAGEE1Q9HCI5 957 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 PCDH12Q9NPG4 1184 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 CD93Q9NPY3 652 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 NFS1Q9Y697 457 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 THADAQ6YHU6 1953 aa12.67□□□□□ -0.38
SF3B3-206ENST00000565990 H0Y858 1186 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 TP73O15350 636 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 FAM153BP0C7A2 387 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 HLA-DPA1P20036 260 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 TPSB2P20231 275 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 NFKBIAP25963 317 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 LSP1P33241 339 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 HNF1BP35680 557 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 ADCY8P40145 1251 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 ELP6Q0PNE2 266 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 CBLBQ13191 982 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 KCNJ11Q14654 390 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 PPP1R7Q15435 360 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 TPSAB1Q15661 275 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 PCSK7Q16549 785 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 FAM153CQ494X1 144 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 FAXCQ5TGI0 409 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 DUPD1Q68J44 220 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 NAPEPLDQ6IQ20 393 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 SLC36A4Q6YBV0 504 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 KDELC2Q7Z4H8 507 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 TMC3Q7Z5M5 1100 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 PCGF5Q86SE9 256 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 LINC00523Q86TU6 105 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 NAT8LQ8N9F0 302 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 MCUQ8NE86 351 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 IPMKQ8NFU5 416 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 CADM4Q8NFZ8 388 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 OR2T34Q8NGX1 318 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 GANCQ8TET4 914 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 PDCD6IPQ8WUM4 868 aaKnown RBP12.66□□□□□ -0.38
SF3B3-206ENST00000565990 CPT1BQ92523 772 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 ZC3H10Q96K80 434 aaKnown RBP12.66□□□□□ -0.38
SF3B3-206ENST00000565990 SRPK1Q96SB4 655 aaKnown RBP12.66□□□□□ -0.38
SF3B3-206ENST00000565990 ERP44Q9BS26 406 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 TXLNGYQ9BZA5 131 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 STMN4Q9H169 189 aaPredicted RBP12.66□□□□□ -0.38
SF3B3-206ENST00000565990 PREBQ9HCU5 417 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 TPX2Q9ULW0 747 aaKnown RBP12.66□□□□□ -0.38
SF3B3-206ENST00000565990 CYP8B1Q9UNU6 501 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 PCDHGA2Q9Y5H1 932 aa12.66□□□□□ -0.38
SF3B3-206ENST00000565990 SPAG17Q6Q759 2223 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 METTL12A8MUP2 240 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 F5H423 210 aaPredicted RBP12.65□□□□□ -0.38
SF3B3-206ENST00000565990 NDUFAB1O14561 156 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 SEMA4FO95754 770 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 FAM107AO95990 144 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 FGF1P05230 155 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 APRTP07741 180 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 HOXD11P31277 338 aaPredicted RBP12.65□□□□□ -0.38
SF3B3-206ENST00000565990 MMP12P39900 470 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 CHRNA4P43681 627 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 PTSQ03393 145 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 TCF15Q12870 199 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 RALGDSQ12967 914 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 SPARCL1Q14515 664 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 AGERQ15109 404 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 CEP85LQ5SZL2 805 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 RNASEH2BQ5TBB1 312 aaKnown RBP12.65□□□□□ -0.38
SF3B3-206ENST00000565990 ERAP2Q6P179 960 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 LRRC8BQ6P9F7 803 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 CRTC1Q6UUV9 634 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 DPPA4Q7L190 304 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 C11orf74Q86VG3 221 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 TRIM69Q86WT6 500 aa12.65□□□□□ -0.38
SF3B3-206ENST00000565990 CACUL1Q86Y37 369 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms