RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 C10orf88Q9H8K7 445 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 GPR27Q9NS67 375 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 COQ6Q9Y2Z9 468 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 RAI2Q9Y5P3 530 aa13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 COL5A1P20908 1838 aaPredicted RBP13.89□□□□□ -0.19
HERPUD1-210ENST00000565966 TCRBV7S2A1N4TA0A589 114 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 MTSS1O43312 755 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 FZD6O60353 706 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 ELFN1P0C7U0 828 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 CYP2A6P11509 494 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 RBL1P28749 1068 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 EPHA8P29322 1005 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 EIF3EP60228 445 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 PFN3P60673 137 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 YPEL5P62699 121 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 SIM1P81133 766 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 SKOR1P84550 965 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 RALGDSQ12967 914 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 LRRC14Q15048 493 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 SEL1L2Q5TEA6 688 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 GATAD2AQ86YP4 633 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 SLC22A18ASQ8N1D0 253 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 BAHD1Q8TBE0 780 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 PIH1D2Q8WWB5 315 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 HTR3CQ8WXA8 447 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 SCRN2Q96FV2 425 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 TEKT5Q96M29 485 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 CDC6Q99741 560 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 FAM118BQ9BPY3 351 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 TDRD1Q9BXT4 1180 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 GLOD4Q9HC38 313 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 MBNL1Q9NR56 388 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 TRMT1Q9NXH9 659 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 BTBD3Q9Y2F9 522 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 PPIL1Q9Y3C6 166 aa13.88□□□□□ -0.19
HERPUD1-210ENST00000565966 KNTC1P50748 2209 aa13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 SPTY2D1-AS1A0A0U1RR47 76 aa13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 SPAARA0A1B0GVQ0 90 aa13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 GOLGA6L9A6NEM1 432 aa13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 PDHA1P08559 390 aa13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 RBP3P10745 1247 aa13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 CA4P22748 312 aa13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 VIPR1P32241 457 aa13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 CD68P34810 354 aaPredicted RBP13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 IGFALSP35858 605 aa13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 CD86P42081 329 aa13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 PDE1CQ14123 709 aaPredicted RBP13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 PTK2BQ14289 1009 aa13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 WSCD2Q2TBF2 565 aa13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 GLRX5Q86SX6 157 aa13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 CDKL3Q8IVW4 592 aaPredicted RBP13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 TTC13Q8NBP0 860 aa13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 IMP4Q96G21 291 aaKnown RBP13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 SLC25A51Q9H1U9 297 aa13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 CARD9Q9H257 536 aa13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 KCTD5Q9NXV2 234 aa13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 B4GALT6Q9UBX8 382 aa13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 PYCARDQ9ULZ3 195 aa13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 R3HDM2Q9Y2K5 976 aaKnown RBP13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 PTPRBP23467 1997 aa13.87□□□□□ -0.19
HERPUD1-210ENST00000565966 LRP4O75096 1905 aa13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 A8MX80 341 aa13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 RECQL5O94762 991 aaPredicted RBP13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 PRLP01236 227 aa13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 PMLP29590 882 aa13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 THOP1P52888 689 aa13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 EPHB1P54762 984 aa13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 ARHGEF7Q14155 803 aa13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 FZD2Q14332 565 aa13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 IRF4Q15306 451 aa13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 DARS2Q6PI48 645 aaKnown RBP13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 USP45Q70EL2 814 aa13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 PID1Q7Z2X4 250 aa13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 KANSL1Q7Z3B3 1105 aa13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 PARGQ86W56 976 aa13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 SLC13A5Q86YT5 568 aaPredicted RBP13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 ZNF567Q8N184 647 aa13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 TADA1Q96BN2 335 aa13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 MCCC1Q96RQ3 725 aaPredicted RBP13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 RBM15Q96T37 977 aaKnown RBP eCLIP13.86□□□□□ -0.196e-7■□□□□ 11
HERPUD1-210ENST00000565966 VAT1Q99536 393 aa13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 DNAJC28Q9NX36 388 aa13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 KLHL8Q9P2G9 620 aaPredicted RBP13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 CHKBQ9Y259 395 aa13.86□□□□□ -0.19
HERPUD1-210ENST00000565966 A0A0J9YYE9 177 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 USP27XA6NNY8 438 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 PSMD11O00231 422 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 TNFSF14O43557 240 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 PIAS2O75928 621 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 HEXIM1O94992 359 aaKnown RBP13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 TRIM16O95361 564 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 TRBC1P01850 177 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 CSF2P04141 144 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 CTPS1P17812 591 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 DGKAP23743 735 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 RPL26P61254 145 aaKnown RBP13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 HNRNPKP61978 463 aaKnown RBP eCLIP13.85□□□□□ -0.198e-13■■■□□ 16.8
HERPUD1-210ENST00000565966 MTM1Q13496 603 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 INPP5AQ14642 412 aa13.85□□□□□ -0.19
HERPUD1-210ENST00000565966 ACOX1Q15067 660 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms