RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 ZNF189O75820 626 aaPredicted RBP16.78■□□□□ 0.28
USB1-211ENST00000565662 HEXIM1O94992 359 aaKnown RBP16.78■□□□□ 0.28
USB1-211ENST00000565662 PCCBP05166 539 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 GIMD1P0DJR0 217 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 CCNB1P14635 433 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 KDELR1P24390 212 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 TRIM23P36406 574 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 ITKQ08881 620 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 MESDQ14696 234 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 RTP5Q14D33 572 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 ACOX1Q15067 660 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 SPA17Q15506 151 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 SLC14A2Q15849 920 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 CCDC13Q8IYE1 715 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 TXLNBQ8N3L3 684 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 ARL10Q8N8L6 244 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 OR56A4Q8NGH8 313 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 PCDH19Q8TAB3 1148 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 RNF157Q96PX1 679 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 SRPK1Q96SB4 655 aaKnown RBP16.78■□□□□ 0.28
USB1-211ENST00000565662 NOD2Q9HC29 1040 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 NT5MQ9NPB1 228 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 MBNL1Q9NR56 388 aaKnown RBP16.78■□□□□ 0.28
USB1-211ENST00000565662 B4GALT6Q9UBX8 382 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.78■□□□□ 0.28
USB1-211ENST00000565662 IGF2RP11717 2491 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 KNTC1P50748 2209 aa16.78■□□□□ 0.28
USB1-211ENST00000565662 GOLGA4Q13439 2230 aaKnown RBP16.77■□□□□ 0.28
USB1-211ENST00000565662 LRP4O75096 1905 aa16.77■□□□□ 0.28
USB1-211ENST00000565662 LRRD1A4D1F6 860 aa16.77■□□□□ 0.28
USB1-211ENST00000565662 APOL1O14791 398 aa16.77■□□□□ 0.28
USB1-211ENST00000565662 MTSS1O43312 755 aa16.77■□□□□ 0.28
USB1-211ENST00000565662 CAPNS1P04632 268 aa16.77■□□□□ 0.28
USB1-211ENST00000565662 MYCLP1P12525 358 aaPredicted RBP16.77■□□□□ 0.28
USB1-211ENST00000565662 MLLT3P42568 568 aaPredicted RBP16.77■□□□□ 0.28
USB1-211ENST00000565662 NR2C2P49116 596 aa16.77■□□□□ 0.28
USB1-211ENST00000565662 ADKP55263 362 aaKnown RBP16.77■□□□□ 0.28
USB1-211ENST00000565662 SRP54P61011 504 aaKnown RBP16.77■□□□□ 0.28
USB1-211ENST00000565662 INSM1Q01101 510 aaPredicted RBP16.77■□□□□ 0.28
USB1-211ENST00000565662 DPTQ07507 201 aa16.77■□□□□ 0.28
USB1-211ENST00000565662 TFDP2Q14188 446 aa16.77■□□□□ 0.28
USB1-211ENST00000565662 PDK1Q15118 436 aa16.77■□□□□ 0.28
USB1-211ENST00000565662 ENPP7Q6UWV6 458 aa16.77■□□□□ 0.28
USB1-211ENST00000565662 ZNF765Q7L2R6 523 aa16.77■□□□□ 0.28
USB1-211ENST00000565662 NLRP8Q86W28 1048 aa16.77■□□□□ 0.28
USB1-211ENST00000565662 ZSWIM9Q86XI8 627 aa16.77■□□□□ 0.28
USB1-211ENST00000565662 NETO2Q8NC67 525 aa16.77■□□□□ 0.28
USB1-211ENST00000565662 IFI44Q8TCB0 444 aa16.77■□□□□ 0.28
USB1-211ENST00000565662 MAPK15Q8TD08 544 aa16.77■□□□□ 0.28
USB1-211ENST00000565662 RBM15Q96T37 977 aaKnown RBP eCLIP16.77■□□□□ 0.28
USB1-211ENST00000565662 SEMA3CQ99985 751 aa16.77■□□□□ 0.28
USB1-211ENST00000565662 PACSIN1Q9BY11 444 aa16.77■□□□□ 0.28
USB1-211ENST00000565662 ADGRE3Q9BY15 652 aa16.77■□□□□ 0.28
USB1-211ENST00000565662 COQ6Q9Y2Z9 468 aa16.77■□□□□ 0.28
USB1-211ENST00000565662 RAI2Q9Y5P3 530 aa16.77■□□□□ 0.28
USB1-211ENST00000565662 A0A0A6YYK5 440 aaPredicted RBP16.76■□□□□ 0.27
USB1-211ENST00000565662 TMX2-CTNND1H3BSU7 103 aa16.76■□□□□ 0.27
USB1-211ENST00000565662 SPOPO43791 374 aa16.76■□□□□ 0.27
USB1-211ENST00000565662 OPA1O60313 960 aa16.76■□□□□ 0.27
USB1-211ENST00000565662 MT-CO3P00414 261 aa16.76■□□□□ 0.27
USB1-211ENST00000565662 CD48P09326 243 aa16.76■□□□□ 0.27
USB1-211ENST00000565662 ACTN2P35609 894 aa16.76■□□□□ 0.27
USB1-211ENST00000565662 PPIDQ08752 370 aaKnown RBP16.76■□□□□ 0.27
USB1-211ENST00000565662 TARDBPQ13148 414 aaKnown RBP eCLIP16.76■□□□□ 0.27
USB1-211ENST00000565662 MMRN1Q13201 1228 aa16.76■□□□□ 0.27
USB1-211ENST00000565662 TBX2Q13207 712 aaPredicted RBP16.76■□□□□ 0.27
USB1-211ENST00000565662 CNGA3Q16281 694 aa16.76■□□□□ 0.27
USB1-211ENST00000565662 ZNF542PQ5EBM4 170 aa16.76■□□□□ 0.27
USB1-211ENST00000565662 SLC9A4Q6AI14 798 aa16.76■□□□□ 0.27
USB1-211ENST00000565662 PNCKQ6P2M8 343 aa16.76■□□□□ 0.27
USB1-211ENST00000565662 HID1Q8IV36 788 aa16.76■□□□□ 0.27
USB1-211ENST00000565662 NRSN1Q8IZ57 195 aa16.76■□□□□ 0.27
USB1-211ENST00000565662 CCNYQ8ND76 341 aa16.76■□□□□ 0.27
USB1-211ENST00000565662 KIAA1524Q8TCG1 905 aa16.76■□□□□ 0.27
USB1-211ENST00000565662 DTD2Q96FN9 168 aa16.76■□□□□ 0.27
USB1-211ENST00000565662 MRFAP1L1Q96HT8 127 aa16.76■□□□□ 0.27
USB1-211ENST00000565662 COQ10AQ96MF6 247 aa16.76■□□□□ 0.27
USB1-211ENST00000565662 FERMT1Q9BQL6 677 aa16.76■□□□□ 0.27
USB1-211ENST00000565662 CDH19Q9H159 772 aa16.76■□□□□ 0.27
USB1-211ENST00000565662 RBM22Q9NW64 420 aaKnown RBP eCLIP16.76■□□□□ 0.27
USB1-211ENST00000565662 PCDHGC4Q9Y5F7 938 aa16.76■□□□□ 0.27
USB1-211ENST00000565662 RGSL1A5PLK6 1076 aa16.75■□□□□ 0.27
USB1-211ENST00000565662 TNNT3P45378 269 aaPredicted RBP16.75■□□□□ 0.27
USB1-211ENST00000565662 TAS2R40P59535 323 aa16.75■□□□□ 0.27
USB1-211ENST00000565662 IFI35P80217 286 aaPredicted RBP16.75■□□□□ 0.27
USB1-211ENST00000565662 TRAF2Q12933 501 aa16.75■□□□□ 0.27
USB1-211ENST00000565662 ALG11Q2TAA5 492 aa16.75■□□□□ 0.27
USB1-211ENST00000565662 DEFB133Q30KQ1 61 aa16.75■□□□□ 0.27
USB1-211ENST00000565662 CDCP2Q5VXM1 449 aa16.75■□□□□ 0.27
USB1-211ENST00000565662 PGBD5Q8N414 524 aa16.75■□□□□ 0.27
USB1-211ENST00000565662 LYSMD1Q96S90 227 aa16.75■□□□□ 0.27
USB1-211ENST00000565662 CHP1Q99653 195 aa16.75■□□□□ 0.27
USB1-211ENST00000565662 TDRD1Q9BXT4 1180 aaKnown RBP16.75■□□□□ 0.27
USB1-211ENST00000565662 RAD18Q9NS91 495 aa16.75■□□□□ 0.27
USB1-211ENST00000565662 SPTLC3Q9NUV7 552 aa16.75■□□□□ 0.27
USB1-211ENST00000565662 DTLQ9NZJ0 730 aa16.75■□□□□ 0.27
USB1-211ENST00000565662 KLF15Q9UIH9 416 aa16.75■□□□□ 0.27
USB1-211ENST00000565662 TTLL3Q9Y4R7 772 aa16.75■□□□□ 0.27
USB1-211ENST00000565662 OR1A2Q9Y585 309 aa16.75■□□□□ 0.27
USB1-211ENST00000565662 ASPMQ8IZT6 3477 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms