RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 SEC24AO95486 1093 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 PTBP3O95758 552 aaKnown RBP6.31□□□□□ -1.4
PTPN9-204ENST00000564970 TNNC2P02585 160 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 RB1P06400 928 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 APOA4P06727 396 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 KRT19P08727 400 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 PLA2G4BP0C869 781 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 DUX4L2P0CJ85 424 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 DUX4L3P0CJ86 424 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 DUX4L4P0CJ87 422 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 DUX4L5P0CJ88 424 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 DUX4L6P0CJ89 424 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 DUX4L7P0CJ90 424 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 SELLP14151 372 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 SLC2A4P14672 509 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 POU2F1P14859 743 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 DDCP20711 480 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 CD247P20963 164 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 MATN1P21941 496 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 CYP7A1P22680 504 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 ATP2B4P23634 1241 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 IL1R2P27930 398 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 UQCRC1P31930 480 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 L1CAMP32004 1257 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 GUCY1A2P33402 732 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 CAPGP40121 348 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 CCT3P49368 545 aaKnown RBP6.31□□□□□ -1.4
PTPN9-204ENST00000564970 NT5C2P49902 561 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 DNA2P51530 1060 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 CLCN4P51793 760 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 GPR143P51810 404 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 EPHB1P54762 984 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 FKBP3Q00688 224 aaKnown RBP6.31□□□□□ -1.4
PTPN9-204ENST00000564970 CTBSQ01459 385 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 MVKQ03426 396 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 PTPN12Q05209 780 aaKnown RBP6.31□□□□□ -1.4
PTPN9-204ENST00000564970 DBPQ10586 325 aaPredicted RBP6.31□□□□□ -1.4
PTPN9-204ENST00000564970 SLC39A6Q13433 755 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 BFSP2Q13515 415 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 DNASE1L3Q13609 305 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 MTMR2Q13614 643 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 KCNJ11Q14654 390 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 PUM1Q14671 1186 aaKnown RBP eCLIP6.31□□□□□ -1.4
PTPN9-204ENST00000564970 NFIXQ14938 502 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 SEC23AQ15436 765 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 RTN1Q16799 776 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 COL28A1Q2UY09 1125 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 PARP15Q460N3 678 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 SLC36A3Q495N2 470 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 GPAT3Q53EU6 434 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 C6orf132Q5T0Z8 1188 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 GPR158Q5T848 1215 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 FAXCQ5TGI0 409 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 ANGEL2Q5VTE6 544 aaKnown RBP6.31□□□□□ -1.4
PTPN9-204ENST00000564970 FBXO31Q5XUX0 539 aaPredicted RBP6.31□□□□□ -1.4
PTPN9-204ENST00000564970 CIAPIN1Q6FI81 312 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 PM20D1Q6GTS8 502 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 TIGD7Q6NT04 549 aaPredicted RBP6.31□□□□□ -1.4
PTPN9-204ENST00000564970 CHADLQ6NUI6 762 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 C16orf46Q6P387 395 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 CRTC3Q6UUV7 619 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 ZBTB49Q6ZSB9 765 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 RTL10Q7L3V2 364 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 G2E3Q7L622 706 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 OVCH2Q7RTZ1 564 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 SLC13A5Q86YT5 568 aaPredicted RBP6.31□□□□□ -1.4
PTPN9-204ENST00000564970 DEFB107AQ8IZN7 70 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 C8orf59Q8N0T1 100 aaPredicted RBP6.31□□□□□ -1.4
PTPN9-204ENST00000564970 EID3Q8N140 333 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 MPP5Q8N3R9 675 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 TMEM199Q8N511 208 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 EMC1Q8N766 993 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 SLC37A3Q8NCC5 494 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 TRPV3Q8NET8 790 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 RP9Q8TA86 221 aaKnown RBP6.31□□□□□ -1.4
PTPN9-204ENST00000564970 ZNF461Q8TAF7 563 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 FBXW5Q969U6 566 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 CPNE4Q96A23 557 aaPredicted RBP6.31□□□□□ -1.4
PTPN9-204ENST00000564970 COL26A1Q96A83 441 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 EAF2Q96CJ1 260 aaPredicted RBP6.31□□□□□ -1.4
PTPN9-204ENST00000564970 ASB9Q96DX5 294 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 CCDC120Q96HB5 630 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 CNDP1Q96KN2 507 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 HSFY1Q96LI6 401 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 RILPQ96NA2 401 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 FOPNLQ96NB1 174 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 CPXM1Q96SM3 734 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 PHOX2BQ99453 314 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 EYA3Q99504 573 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 FAM118BQ9BPY3 351 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 ZSWIM1Q9BR11 485 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 MTG1Q9BT17 334 aaPredicted RBP6.31□□□□□ -1.4
PTPN9-204ENST00000564970 PDCD10Q9BUL8 212 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 SLC22A4Q9H015 551 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 SHARPINQ9H0F6 387 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 SPNS1Q9H2V7 528 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 OR51M1Q9H341 326 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 BOLA2Q9H3K6 86 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 SNX15Q9NRS6 342 aa6.31□□□□□ -1.4
PTPN9-204ENST00000564970 SETD4Q9NVD3 440 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms