RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 C16orf70Q9BSU1 422 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 C2orf40Q9H1Z8 148 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 VRTNQ9H8Y1 702 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 IARS2Q9NSE4 1012 aaKnown RBP16.35■□□□□ 0.21
LINC00554-201ENST00000564841 SNX9Q9Y5X1 595 aa16.35■□□□□ 0.21
LINC00554-201ENST00000564841 IGKV6-21A0A0C4DH24 114 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 POLBP06746 335 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 POLD3Q15054 466 aaPredicted RBP16.34■□□□□ 0.21
LINC00554-201ENST00000564841 GRIK4Q16099 956 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 IMPG1Q17R60 797 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 PAGE2BQ5JRK9 111 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 FAM209AQ5JX71 171 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 HOMEZQ8IX15 550 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 HTR3CQ8WXA8 447 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 PARK7Q99497 189 aaKnown RBP16.34■□□□□ 0.21
LINC00554-201ENST00000564841 OSMRQ99650 979 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 UPF3AQ9H1J1 476 aaKnown RBP16.34■□□□□ 0.21
LINC00554-201ENST00000564841 CDHR5Q9HBB8 845 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 SCHIP1Q9P0W5 487 aaPredicted RBP16.34■□□□□ 0.21
LINC00554-201ENST00000564841 XPR1Q9UBH6 696 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 TSPAN16Q9UKR8 245 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 KCNK1O00180 336 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 NME4O00746 187 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 CHEK2O96017 543 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 TGM1P22735 817 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 BMPR1AP36894 532 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 TNFAIP2Q03169 654 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 CBLBQ13191 982 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 LAMA3Q16787 3333 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 PYCR3Q53H96 274 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 CERCAMQ5T4B2 595 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 PMF1Q6P1K2 205 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.34■□□□□ 0.21
LINC00554-201ENST00000564841 SPPL2BQ8TCT7 592 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 SEPT8Q92599 483 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 TMEM176AQ96HP8 235 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 SEZ6LQ9BYH1 1024 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 LHX5Q9H2C1 402 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 AGPAT4Q9NRZ5 378 aa16.34■□□□□ 0.21
LINC00554-201ENST00000564841 ZBBXA8MT70 800 aa16.33■□□□□ 0.21
LINC00554-201ENST00000564841 PROZP22891 400 aa16.33■□□□□ 0.21
LINC00554-201ENST00000564841 MAGEA12P43365 314 aa16.33■□□□□ 0.21
LINC00554-201ENST00000564841 MAPRE1Q15691 268 aaKnown RBP16.33■□□□□ 0.21
LINC00554-201ENST00000564841 CRTC3Q6UUV7 619 aa16.33■□□□□ 0.21
LINC00554-201ENST00000564841 ZYG11AQ6WRX3 759 aa16.33■□□□□ 0.21
LINC00554-201ENST00000564841 EXOC8Q8IYI6 725 aa16.33■□□□□ 0.21
LINC00554-201ENST00000564841 LGI2Q8N0V4 545 aa16.33■□□□□ 0.21
LINC00554-201ENST00000564841 CCNYQ8ND76 341 aa16.33■□□□□ 0.21
LINC00554-201ENST00000564841 SREK1Q8WXA9 508 aaKnown RBP16.33■□□□□ 0.21
LINC00554-201ENST00000564841 VPS39Q96JC1 886 aa16.33■□□□□ 0.21
LINC00554-201ENST00000564841 FUNDC2Q9BWH2 189 aa16.33■□□□□ 0.21
LINC00554-201ENST00000564841 OSBPL2Q9H1P3 480 aa16.33■□□□□ 0.21
LINC00554-201ENST00000564841 SNX25Q9H3E2 840 aa16.33■□□□□ 0.21
LINC00554-201ENST00000564841 FZD8Q9H461 694 aa16.33■□□□□ 0.21
LINC00554-201ENST00000564841 CCM2LQ9NUG4 571 aaPredicted RBP16.33■□□□□ 0.21
LINC00554-201ENST00000564841 UTP6Q9NYH9 597 aaKnown RBP16.33■□□□□ 0.21
LINC00554-201ENST00000564841 TMEM181Q9P2C4 612 aa16.33■□□□□ 0.21
LINC00554-201ENST00000564841 EVLQ9UI08 416 aaPredicted RBP16.33■□□□□ 0.21
LINC00554-201ENST00000564841 USP22Q9UPT9 525 aa16.33■□□□□ 0.21
LINC00554-201ENST00000564841 B3GNT3Q9Y2A9 372 aa16.33■□□□□ 0.21
LINC00554-201ENST00000564841 GOT1P17174 413 aa16.33■□□□□ 0.2
LINC00554-201ENST00000564841 CES1P23141 567 aa16.33■□□□□ 0.2
LINC00554-201ENST00000564841 AXLP30530 894 aa16.33■□□□□ 0.2
LINC00554-201ENST00000564841 TTKP33981 857 aa16.33■□□□□ 0.2
LINC00554-201ENST00000564841 GRSF1Q12849 480 aaKnown RBP eCLIP16.33■□□□□ 0.2
LINC00554-201ENST00000564841 TSTD2Q5T7W7 516 aa16.33■□□□□ 0.2
LINC00554-201ENST00000564841 CYS1Q717R9 158 aa16.33■□□□□ 0.2
LINC00554-201ENST00000564841 ITIH5Q86UX2 942 aa16.33■□□□□ 0.2
LINC00554-201ENST00000564841 ZNF641Q96N77 438 aaPredicted RBP16.33■□□□□ 0.2
LINC00554-201ENST00000564841 FLRT1Q9NZU1 646 aa16.33■□□□□ 0.2
LINC00554-201ENST00000564841 ZNF229Q9UJW7 825 aa16.33■□□□□ 0.2
LINC00554-201ENST00000564841 RNF103O00237 685 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 MBL2P11226 248 aaPredicted RBP16.32■□□□□ 0.2
LINC00554-201ENST00000564841 FASP25445 335 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 CAPGP40121 348 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 STX5Q13190 355 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 AGAP7PQ5VUJ5 663 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 TMEM236Q5W0B7 351 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 GTF2IRD2BQ6EKJ0 949 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 GTF2IRD2Q86UP8 949 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 ANKRD13BQ86YJ7 626 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 SIX5Q8N196 739 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 SMG8Q8ND04 991 aaKnown RBP16.32■□□□□ 0.2
LINC00554-201ENST00000564841 PPTC7Q8NI37 304 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 NXNL1Q96CM4 212 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 HPDLQ96IR7 371 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 SEPHS2Q99611 448 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 MRPL46Q9H2W6 279 aaKnown RBP16.32■□□□□ 0.2
LINC00554-201ENST00000564841 ITM2CQ9NQX7 267 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.32■□□□□ 0.2
LINC00554-201ENST00000564841 LOC285556D6RIA3 1793 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 INPP4BO15327 924 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 SEC14L2O76054 403 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 SRP72O76094 671 aaKnown RBP16.32■□□□□ 0.2
LINC00554-201ENST00000564841 HTR1BP28222 390 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 HLCSP50747 726 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 CCT8P50990 548 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 APLP1P51693 650 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 TMBIM6P55061 237 aa16.32■□□□□ 0.2
LINC00554-201ENST00000564841 ATP6AP1Q15904 470 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms