RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 CCHCR1Q8TD31 782 aa16.03■□□□□ 0.16
RAB40C-208ENST00000564703 NAPGQ99747 312 aaPredicted RBP16.03■□□□□ 0.16
RAB40C-208ENST00000564703 GBA3Q9H227 469 aa16.03■□□□□ 0.16
RAB40C-208ENST00000564703 TTC7AQ9ULT0 858 aaPredicted RBP16.03■□□□□ 0.16
RAB40C-208ENST00000564703 GOLGA6L10A0A0M3HER8 536 aa16.02■□□□□ 0.16
RAB40C-208ENST00000564703 NPIPB15A6NHN6 443 aaPredicted RBP16.02■□□□□ 0.16
RAB40C-208ENST00000564703 GOLGA8CPA6NN73 597 aa16.02■□□□□ 0.16
RAB40C-208ENST00000564703 PGRMC1O00264 195 aaKnown RBP16.02■□□□□ 0.16
RAB40C-208ENST00000564703 WNT9AO14904 365 aa16.02■□□□□ 0.16
RAB40C-208ENST00000564703 DFNA5O60443 496 aa16.02■□□□□ 0.16
RAB40C-208ENST00000564703 HEXIM1O94992 359 aaKnown RBP16.02■□□□□ 0.16
RAB40C-208ENST00000564703 ITGAVP06756 1048 aa16.02■□□□□ 0.16
RAB40C-208ENST00000564703 ZNF30P17039 623 aa16.02■□□□□ 0.16
RAB40C-208ENST00000564703 FGL2Q14314 439 aa16.02■□□□□ 0.16
RAB40C-208ENST00000564703 QPCTQ16769 361 aa16.02■□□□□ 0.16
RAB40C-208ENST00000564703 P3H1Q32P28 736 aa16.02■□□□□ 0.16
RAB40C-208ENST00000564703 DRICH1Q6PGQ1 229 aaPredicted RBP16.02■□□□□ 0.16
RAB40C-208ENST00000564703 CRTC1Q6UUV9 634 aa16.02■□□□□ 0.16
RAB40C-208ENST00000564703 DCP2Q8IU60 420 aaKnown RBP16.02■□□□□ 0.16
RAB40C-208ENST00000564703 DENND6BQ8NEG7 585 aa16.02■□□□□ 0.16
RAB40C-208ENST00000564703 IPMKQ8NFU5 416 aa16.02■□□□□ 0.16
RAB40C-208ENST00000564703 TADA1Q96BN2 335 aa16.02■□□□□ 0.16
RAB40C-208ENST00000564703 MS4A14Q96JA4 679 aa16.02■□□□□ 0.16
RAB40C-208ENST00000564703 MCCC1Q96RQ3 725 aaPredicted RBP16.02■□□□□ 0.16
RAB40C-208ENST00000564703 EDEM2Q9BV94 578 aa16.02■□□□□ 0.16
RAB40C-208ENST00000564703 FZD3Q9NPG1 666 aa16.02■□□□□ 0.16
RAB40C-208ENST00000564703 COQ6Q9Y2Z9 468 aa16.02■□□□□ 0.16
RAB40C-208ENST00000564703 SAR1BQ9Y6B6 198 aa16.02■□□□□ 0.16
RAB40C-208ENST00000564703 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.01■□□□□ 0.15
RAB40C-208ENST00000564703 A0A1W2PR77 199 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 LNP1A1A4G5 178 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 CAPN8A6NHC0 703 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 A6NNZ2 444 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 PSMD11O00231 422 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 TOR1BO14657 336 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 RECQL5O94762 991 aaPredicted RBP16.01■□□□□ 0.15
RAB40C-208ENST00000564703 CER1O95813 267 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 THEGLP0DJG4 465 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 SDHBP21912 280 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 PSMB4P28070 264 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 CASQ1P31415 396 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 CLDN2P57739 230 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 RALGDSQ12967 914 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 GALNT3Q14435 633 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 OASLQ15646 514 aaKnown RBP16.01■□□□□ 0.15
RAB40C-208ENST00000564703 HS1BP3Q53T59 392 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 C4orf22Q6V702 233 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 Q6ZSR6 202 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 TMEM145Q8NBT3 493 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 ATL2Q8NHH9 583 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 ACTRT1Q8TDG2 376 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 COG1Q8WTW3 980 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 MAGOHBQ96A72 148 aaKnown RBP16.01■□□□□ 0.15
RAB40C-208ENST00000564703 CENPTQ96BT3 561 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 WDR24Q96S15 920 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 MAGEE1Q9HCI5 957 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 TMEM9BQ9NQ34 198 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 FSCN3Q9NQT6 498 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 GDF3Q9NR23 364 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 FEZ2Q9UHY8 353 aaPredicted RBP16.01■□□□□ 0.15
RAB40C-208ENST00000564703 CA5BQ9Y2D0 317 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 SLCO1B1Q9Y6L6 691 aa16.01■□□□□ 0.15
RAB40C-208ENST00000564703 KNL1Q8NG31 2342 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 C1orf232A0A0U1RR37 186 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 LOC285095A0A1B0GVY8 99 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 RAD51BO15315 384 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 HLA-DPA1P20036 260 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 HOXD11P31277 338 aaPredicted RBP16■□□□□ 0.15
RAB40C-208ENST00000564703 PAFAH1B1P43034 410 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 RABIFP47224 123 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 LMAN1P49257 510 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 THOP1P52888 689 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 GDF10P55107 478 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 GRIK2Q13002 908 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 PTK2BQ14289 1009 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 AGERQ15109 404 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 SIX1Q15475 284 aaPredicted RBP16■□□□□ 0.15
RAB40C-208ENST00000564703 CNGA3Q16281 694 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 KIF19Q2TAC6 998 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 HLA-BQ31612 363 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 PAPD7Q5XG87 772 aaKnown RBP16■□□□□ 0.15
RAB40C-208ENST00000564703 LRRC66Q68CR7 880 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 KDELC1Q6UW63 502 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 C17orf53Q8N3J3 647 aaPredicted RBP16■□□□□ 0.15
RAB40C-208ENST00000564703 MINDY1Q8N5J2 469 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 SLC25A41Q8N5S1 370 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 OXNAD1Q96HP4 312 aaPredicted RBP16■□□□□ 0.15
RAB40C-208ENST00000564703 BMFQ96LC9 184 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 TRIB3Q96RU7 358 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 LYSMD1Q96S90 227 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 KLF6Q99612 283 aaPredicted RBP16■□□□□ 0.15
RAB40C-208ENST00000564703 AP1M1Q9BXS5 423 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 GPR63Q9BZJ6 419 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 GAREM1Q9H706 876 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 SNX11Q9Y5W9 270 aa16■□□□□ 0.15
RAB40C-208ENST00000564703 PIEZO1Q92508 2521 aa15.99■□□□□ 0.15
RAB40C-208ENST00000564703 POM121BA6NF01 834 aa15.99■□□□□ 0.15
RAB40C-208ENST00000564703 E7EVH7 732 aa15.99■□□□□ 0.15
RAB40C-208ENST00000564703 ZNF185O15231 689 aa15.99■□□□□ 0.15
RAB40C-208ENST00000564703 GDF9O60383 454 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms