RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 FTH1P19P0C7X4 201 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 CDK4P11802 303 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 CTNNA2P26232 953 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 HTR1BP28222 390 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 CTNNA1P35221 906 aaKnown RBP13.44□□□□□ -0.26
CLK3-216ENST00000564468 BLKP51451 505 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 RPL26P61254 145 aaKnown RBP13.44□□□□□ -0.26
CLK3-216ENST00000564468 DSC2Q02487 901 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 RALGDSQ12967 914 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 MTM1Q13496 603 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 IRF4Q15306 451 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 WSCD2Q2TBF2 565 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 NPNTQ6UXI9 565 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 MACC1Q6ZN28 852 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 EID2Q8N6I1 236 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 CCDC112Q8NEF3 446 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 TFB1MQ8WVM0 346 aaKnown RBP13.44□□□□□ -0.26
CLK3-216ENST00000564468 UBE2Q2Q8WVN8 375 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 NSMCE3Q96MG7 304 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 OLFM3Q96PB7 478 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 FERMT1Q9BQL6 677 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 LACRTQ9GZZ8 138 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 MBNL1Q9NR56 388 aaKnown RBP13.44□□□□□ -0.26
CLK3-216ENST00000564468 EVA1BQ9NVM1 165 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 AMFRQ9UKV5 643 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 RPL26L1Q9UNX3 145 aaKnown RBP13.44□□□□□ -0.26
CLK3-216ENST00000564468 EFR3BQ9Y2G0 817 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 DUSP10Q9Y6W6 482 aa13.44□□□□□ -0.26
CLK3-216ENST00000564468 hCG_1818297A0A087WSY0 165 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 PDE2AO00408 941 aaPredicted RBP13.43□□□□□ -0.26
CLK3-216ENST00000564468 ENC1O14682 589 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 FZD6O60353 706 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 RECQL5O94762 991 aaPredicted RBP13.43□□□□□ -0.26
CLK3-216ENST00000564468 HOXB3P14651 431 aaPredicted RBP13.43□□□□□ -0.26
CLK3-216ENST00000564468 NME1P15531 152 aaKnown RBP13.43□□□□□ -0.26
CLK3-216ENST00000564468 ZNF30P17039 623 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 KELP23276 732 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 DGKAP23743 735 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 RWDD2BP57060 319 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 FZD2Q14332 565 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 ACOX1Q15067 660 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 CCDC181Q5TID7 509 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 KANSL1Q7Z3B3 1105 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 RNF10Q8N5U6 811 aaKnown RBP13.43□□□□□ -0.26
CLK3-216ENST00000564468 NBEAQ8NFP9 2946 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 ARRDC2Q8TBH0 407 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 PIH1D2Q8WWB5 315 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 ADAMTS14Q8WXS8 1223 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 CNDP2Q96KP4 475 aaKnown RBP13.43□□□□□ -0.26
CLK3-216ENST00000564468 TBATAQ96M53 351 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 MCCC1Q96RQ3 725 aaPredicted RBP13.43□□□□□ -0.26
CLK3-216ENST00000564468 APOOQ9BUR5 198 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 DUSP23Q9BVJ7 150 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 TMEM121BQ9BXQ6 578 aaPredicted RBP13.43□□□□□ -0.26
CLK3-216ENST00000564468 TDRD1Q9BXT4 1180 aaKnown RBP13.43□□□□□ -0.26
CLK3-216ENST00000564468 TSGA10Q9BZW7 698 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 PCDH9Q9HC56 1237 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 SEPT10Q9P0V9 454 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 MSRB2Q9Y3D2 182 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 CSNK1G3Q9Y6M4 447 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 LRP4O75096 1905 aa13.43□□□□□ -0.26
CLK3-216ENST00000564468 A0A0J9YYE9 177 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 A8MX80 341 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 MIF4GDA9UHW6 222 aaKnown RBP13.42□□□□□ -0.26
CLK3-216ENST00000564468 HACD1B0YJ81 288 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 CACNB4O00305 520 aaPredicted RBP13.42□□□□□ -0.26
CLK3-216ENST00000564468 KRT86O43790 486 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 SDC3O75056 442 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 ZNF189O75820 626 aaPredicted RBP13.42□□□□□ -0.26
CLK3-216ENST00000564468 HEXIM1O94992 359 aaKnown RBP13.42□□□□□ -0.26
CLK3-216ENST00000564468 TRBC1P01850 177 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 C1SP09871 688 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 JUNDP17535 347 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 SEMG2Q02383 582 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 PPARDQ03181 441 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 ZBTB17Q13105 803 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 ZNF211Q13398 564 aaPredicted RBP13.42□□□□□ -0.26
CLK3-216ENST00000564468 INPP5AQ14642 412 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 NFATC4Q14934 902 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 SLC14A2Q15849 920 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 CNGA3Q16281 694 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 TEX44Q53QW1 395 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 BBS12Q6ZW61 710 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 PEX26Q7Z412 305 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 NT5DC3Q86UY8 548 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 RAVER1Q8IY67 606 aaKnown RBP13.42□□□□□ -0.26
CLK3-216ENST00000564468 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.42□□□□□ -0.26
CLK3-216ENST00000564468 UBL4BQ8N7F7 174 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 OR4C6Q8NH72 309 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 LRRN4Q8WUT4 740 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 KRT35Q92764 455 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 NUS1Q96E22 293 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 VAT1Q99536 393 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 ADGRE3Q9BY15 652 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 SLC13A1Q9BZW2 595 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 SLC25A51Q9H1U9 297 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 NLGN3Q9NZ94 848 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 SPASTQ9UBP0 616 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 CHKBQ9Y259 395 aa13.42□□□□□ -0.26
CLK3-216ENST00000564468 PCDHGA1Q9Y5H4 931 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms