RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 PSMD11O00231 422 aa15.05■□□□□ -0
SPG7-210ENST00000564409 NTN3O00634 580 aaPredicted RBP15.05■□□□□ -0
SPG7-210ENST00000564409 PCCBP05166 539 aa15.05■□□□□ -0
SPG7-210ENST00000564409 CYP2A6P11509 494 aaPredicted RBP15.05■□□□□ -0
SPG7-210ENST00000564409 PTMSP20962 102 aa15.05■□□□□ -0
SPG7-210ENST00000564409 AMPD1P23109 780 aa15.05■□□□□ -0
SPG7-210ENST00000564409 CES1P23141 567 aa15.05■□□□□ -0
SPG7-210ENST00000564409 TLE3Q04726 772 aa15.05■□□□□ -0
SPG7-210ENST00000564409 COL9A2Q14055 689 aaPredicted RBP15.05■□□□□ -0
SPG7-210ENST00000564409 HADHQ16836 314 aaKnown RBP15.05■□□□□ -0
SPG7-210ENST00000564409 SMTNL2Q2TAL5 461 aa15.05■□□□□ -0
SPG7-210ENST00000564409 PERM1Q5SV97 790 aa15.05■□□□□ -0
SPG7-210ENST00000564409 MARC1Q5VT66 337 aa15.05■□□□□ -0
SPG7-210ENST00000564409 RD3Q7Z3Z2 195 aa15.05■□□□□ -0
SPG7-210ENST00000564409 SPACA3Q8IXA5 215 aa15.05■□□□□ -0
SPG7-210ENST00000564409 WDR36Q8NI36 951 aaKnown RBP15.05■□□□□ -0
SPG7-210ENST00000564409 PCDH19Q8TAB3 1148 aa15.05■□□□□ -0
SPG7-210ENST00000564409 COQ10AQ96MF6 247 aa15.05■□□□□ -0
SPG7-210ENST00000564409 SLC46A1Q96NT5 459 aa15.05■□□□□ -0
SPG7-210ENST00000564409 CCDC3Q9BQI4 270 aa15.05■□□□□ -0
SPG7-210ENST00000564409 NUP85Q9BW27 656 aa15.05■□□□□ -0
SPG7-210ENST00000564409 THAP2Q9H0W7 228 aa15.05■□□□□ -0
SPG7-210ENST00000564409 WDR26Q9H7D7 661 aa15.05■□□□□ -0
SPG7-210ENST00000564409 ASCL3Q9NQ33 180 aa15.05■□□□□ -0
SPG7-210ENST00000564409 GULP1Q9UBP9 304 aa15.05■□□□□ -0
SPG7-210ENST00000564409 ANAPC7Q9UJX3 599 aa15.05■□□□□ -0
SPG7-210ENST00000564409 CELSR3Q9NYQ7 3312 aa15.05■□□□□ -0
SPG7-210ENST00000564409 SYCE3A1L190 88 aa15.04■□□□□ -0
SPG7-210ENST00000564409 PEX11BO96011 259 aa15.04■□□□□ -0
SPG7-210ENST00000564409 CPP00450 1065 aa15.04■□□□□ -0
SPG7-210ENST00000564409 TPM3P06753 285 aa15.04■□□□□ -0
SPG7-210ENST00000564409 PNLIPP16233 465 aa15.04■□□□□ -0
SPG7-210ENST00000564409 TEAD1P28347 426 aa15.04■□□□□ -0
SPG7-210ENST00000564409 VIPR1P32241 457 aa15.04■□□□□ -0
SPG7-210ENST00000564409 MMP13P45452 471 aa15.04■□□□□ -0
SPG7-210ENST00000564409 SLC25A11Q02978 314 aaKnown RBP15.04■□□□□ -0
SPG7-210ENST00000564409 CCDC173Q0VFZ6 552 aa15.04■□□□□ -0
SPG7-210ENST00000564409 EIF3IQ13347 325 aaKnown RBP15.04■□□□□ -0
SPG7-210ENST00000564409 ACOX1Q15067 660 aa15.04■□□□□ -0
SPG7-210ENST00000564409 PNCKQ6P2M8 343 aa15.04■□□□□ -0
SPG7-210ENST00000564409 ALKBH5Q6P6C2 394 aaKnown RBP15.04■□□□□ -0
SPG7-210ENST00000564409 GPR155Q7Z3F1 870 aa15.04■□□□□ -0
SPG7-210ENST00000564409 LUZP1Q86V48 1076 aa15.04■□□□□ -0
SPG7-210ENST00000564409 NDUFAF2Q8N183 169 aa15.04■□□□□ -0
SPG7-210ENST00000564409 ARL14Q8N4G2 192 aa15.04■□□□□ -0
SPG7-210ENST00000564409 KYQ8NBH2 561 aa15.04■□□□□ -0
SPG7-210ENST00000564409 PLA2G15Q8NCC3 412 aa15.04■□□□□ -0
SPG7-210ENST00000564409 FAM71BQ8TC56 605 aa15.04■□□□□ -0
SPG7-210ENST00000564409 FUBP1Q96AE4 644 aaKnown RBP15.04■□□□□ -0
SPG7-210ENST00000564409 ATXN7L3BQ96GX2 97 aa15.04■□□□□ -0
SPG7-210ENST00000564409 LIN37Q96GY3 246 aaPredicted RBP15.04■□□□□ -0
SPG7-210ENST00000564409 FCRL3Q96P31 734 aaPredicted RBP15.04■□□□□ -0
SPG7-210ENST00000564409 PCDH18Q9HCL0 1135 aa15.04■□□□□ -0
SPG7-210ENST00000564409 B4GALT6Q9UBX8 382 aa15.04■□□□□ -0
SPG7-210ENST00000564409 AMACRQ9UHK6 382 aa15.04■□□□□ -0
SPG7-210ENST00000564409 SATB2Q9UPW6 733 aa15.04■□□□□ -0
SPG7-210ENST00000564409 PCDHGC4Q9Y5F7 938 aa15.04■□□□□ -0
SPG7-210ENST00000564409 A0A087X0T9 212 aa15.03■□□□□ -0
SPG7-210ENST00000564409 CCDC187A0A096LP49 1063 aa15.03■□□□□ -0
SPG7-210ENST00000564409 TMEM202A6NGA9 273 aa15.03■□□□□ -0
SPG7-210ENST00000564409 PRKCGP05129 697 aa15.03■□□□□ -0
SPG7-210ENST00000564409 FAM228BP0C875 321 aa15.03■□□□□ -0
SPG7-210ENST00000564409 MYCLP1P12525 358 aaPredicted RBP15.03■□□□□ -0
SPG7-210ENST00000564409 TMPRSS3P57727 454 aa15.03■□□□□ -0
SPG7-210ENST00000564409 PEX6Q13608 980 aa15.03■□□□□ -0
SPG7-210ENST00000564409 KRT81Q14533 505 aa15.03■□□□□ -0
SPG7-210ENST00000564409 NFKBIBQ15653 356 aa15.03■□□□□ -0
SPG7-210ENST00000564409 C3orf38Q5JPI3 329 aa15.03■□□□□ -0
SPG7-210ENST00000564409 OGFOD3Q6PK18 319 aa15.03■□□□□ -0
SPG7-210ENST00000564409 MAP7D3Q8IWC1 876 aa15.03■□□□□ -0
SPG7-210ENST00000564409 TP53INP2Q8IXH6 220 aa15.03■□□□□ -0
SPG7-210ENST00000564409 CBARPQ8N350 705 aaPredicted RBP15.03■□□□□ -0
SPG7-210ENST00000564409 TEX26Q8N6G2 289 aa15.03■□□□□ -0
SPG7-210ENST00000564409 GPR156Q8NFN8 814 aa15.03■□□□□ -0
SPG7-210ENST00000564409 KCNE4Q8WWG9 221 aa15.03■□□□□ -0
SPG7-210ENST00000564409 FATE1Q969F0 183 aa15.03■□□□□ -0
SPG7-210ENST00000564409 SCRN2Q96FV2 425 aa15.03■□□□□ -0
SPG7-210ENST00000564409 PDXPQ96GD0 296 aa15.03■□□□□ -0
SPG7-210ENST00000564409 STRADBQ9C0K7 418 aa15.03■□□□□ -0
SPG7-210ENST00000564409 NOD2Q9HC29 1040 aa15.03■□□□□ -0
SPG7-210ENST00000564409 PHPT1Q9NRX4 125 aaPredicted RBP15.03■□□□□ -0
SPG7-210ENST00000564409 ETNK2Q9NVF9 386 aa15.03■□□□□ -0
SPG7-210ENST00000564409 UVRAGQ9P2Y5 699 aa15.03■□□□□ -0
SPG7-210ENST00000564409 APPL1Q9UKG1 709 aa15.03■□□□□ -0
SPG7-210ENST00000564409 PPIL1Q9Y3C6 166 aa15.03■□□□□ -0
SPG7-210ENST00000564409 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.03■□□□□ -03e-9■■■■□ 22
SPG7-210ENST00000564409 BAHCC1Q9P281 2608 aa15.03■□□□□ -0
SPG7-210ENST00000564409 BPTFQ12830 3046 aa15.02■□□□□ -0
SPG7-210ENST00000564409 ATXN7O15265 892 aaPredicted RBP15.02■□□□□ -0
SPG7-210ENST00000564409 HEXIM1O94992 359 aaKnown RBP15.02■□□□□ -0
SPG7-210ENST00000564409 PGLSO95336 258 aa15.02■□□□□ -0
SPG7-210ENST00000564409 CELA2BP08218 269 aaPredicted RBP15.02■□□□□ -0
SPG7-210ENST00000564409 TCF4P15884 667 aa15.02■□□□□ -0
SPG7-210ENST00000564409 GLB1P16278 677 aa15.02■□□□□ -0
SPG7-210ENST00000564409 GM2AP17900 193 aa15.02■□□□□ -0
SPG7-210ENST00000564409 HNRNPH3P31942 346 aaKnown RBP15.02■□□□□ -0
SPG7-210ENST00000564409 PDK2Q15119 407 aa15.02■□□□□ -0
SPG7-210ENST00000564409 CCDC122Q5T0U0 273 aa15.02■□□□□ -0
SPG7-210ENST00000564409 ARMC12Q5T9G4 340 aa15.02■□□□□ -0
SPG7-210ENST00000564409 TIGD7Q6NT04 549 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms