RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 FAM27E3Q08E93 113 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 ALG10Q5BKT4 473 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 ALG10BQ5I7T1 473 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 DAB2IPQ5VWQ8 1189 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 PAPD7Q5XG87 772 aaKnown RBP2.65□□□□□ -1.99
CHD9-209ENST00000564255 FCRLBQ6BAA4 426 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 DLK2Q6UY11 383 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 CCDC186Q7Z3E2 898 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 ADGRF4Q8IZF3 695 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 RBFAQ8N0V3 343 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 GJC3Q8NFK1 279 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 ZNF653Q96CK0 615 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 DGAT2Q96PD7 388 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 GDE1Q9NZC3 331 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 CPSF2Q9P2I0 782 aaKnown RBP2.65□□□□□ -1.99
CHD9-209ENST00000564255 WDR35Q9P2L0 1181 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 PLEKHB1Q9UF11 243 aaPredicted RBP2.65□□□□□ -1.99
CHD9-209ENST00000564255 AGO2Q9UKV8 859 aaKnown RBP2.65□□□□□ -1.99
CHD9-209ENST00000564255 WBP11Q9Y2W2 641 aaKnown RBP2.65□□□□□ -1.99
CHD9-209ENST00000564255 NFE2L3Q9Y4A8 694 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 TRPV2Q9Y5S1 764 aa2.65□□□□□ -1.99
CHD9-209ENST00000564255 TRBV5-3A0A0A0MS03 114 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 A0A0G2JK05 382 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 LNP1A1A4G5 178 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 CNOT3O75175 753 aaKnown RBP2.64□□□□□ -1.99
CHD9-209ENST00000564255 CLDN7O95471 211 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 FYNP06241 537 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 THPOP40225 353 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 PIK3CAP42336 1068 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 SUOXP51687 545 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 ALCAMQ13740 583 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 NAB2Q15742 525 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 SLC10A5Q5PT55 438 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 LRIF1Q5T3J3 769 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 DEF8Q6ZN54 512 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 RBPMS2Q6ZRY4 209 aaKnown RBP2.64□□□□□ -1.99
CHD9-209ENST00000564255 CHST3Q7LGC8 479 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 HAPLN4Q86UW8 402 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 LDLRAD3Q86YD5 345 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 EPHX4Q8IUS5 362 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 LURAP1LQ8IV03 231 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 DENND6AQ8IWF6 608 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 SFTPA2Q8IWL1 248 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 SLC35F3Q8IY50 421 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 TEX45Q8NA69 505 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 APPL2Q8NEU8 664 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 Q8NFD4 153 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 CMASQ8NFW8 434 aaPredicted RBP2.64□□□□□ -1.99
CHD9-209ENST00000564255 OR14L1PQ8NHC6 308 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 ZNF622Q969S3 477 aaKnown RBP eCLIP2.64□□□□□ -1.995e-7■■■■□ 20.3
CHD9-209ENST00000564255 RRNAD1Q96FB5 475 aaKnown RBP2.64□□□□□ -1.99
CHD9-209ENST00000564255 SPATA17Q96L03 361 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 ANKRD2Q9GZV1 360 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 CDT1Q9H211 546 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 ZWILCHQ9H900 591 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 BPIFA1Q9NP55 256 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 ARGLU1Q9NWB6 273 aaPredicted RBP2.64□□□□□ -1.99
CHD9-209ENST00000564255 SELENONQ9NZV5 590 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 CWC15Q9P013 229 aaKnown RBP2.64□□□□□ -1.99
CHD9-209ENST00000564255 OSGIN1Q9UJX0 560 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 RAI2Q9Y5P3 530 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 FLT1P17948 1338 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 A0A087X1B8 175 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 GPR75-ASB3A0A0A6YYF3 556 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 F8W810 466 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 OGG1O15527 345 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 AVILO75366 819 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 JRKO75564 520 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 PSMD10O75832 226 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 C22orf31O95567 290 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 HIST1H2ABP04908 130 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 ABCB1P08183 1280 aaPredicted RBP2.64□□□□□ -1.99
CHD9-209ENST00000564255 ENO3P13929 434 aaPredicted RBP2.64□□□□□ -1.99
CHD9-209ENST00000564255 HIST1H2ADP20671 130 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 MRPS34P82930 218 aaKnown RBP2.64□□□□□ -1.99
CHD9-209ENST00000564255 NAE1Q13564 534 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 COLEC12Q5KU26 742 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 PRAMEF19Q5SWL8 479 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 TMEM71Q6P5X7 295 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 FBXO46Q6PJ61 603 aaPredicted RBP2.64□□□□□ -1.99
CHD9-209ENST00000564255 DCLRE1AQ6PJP8 1040 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 HIST3H2AQ7L7L0 130 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 AACSQ86V21 672 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 BEST2Q8NFU1 509 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 SEMA6DQ8NFY4 1073 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 RASSF8Q8NHQ8 419 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 BICD2Q8TD16 824 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 RMDN1Q96DB5 314 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 ZC3HAV1LQ96H79 300 aaKnown RBP2.64□□□□□ -1.99
CHD9-209ENST00000564255 CFAP57Q96MR6 1250 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 SYT17Q9BSW7 474 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 ST6GALNAC4Q9H4F1 302 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 MRGBPQ9NV56 204 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 MTMR10Q9NXD2 777 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 ARHGEF38Q9NXL2 777 aa2.64□□□□□ -1.99
CHD9-209ENST00000564255 CRNNQ9UBG3 495 aaPredicted RBP2.64□□□□□ -1.99
CHD9-209ENST00000564255 LINC01548A6NM66 108 aa2.63□□□□□ -1.99
CHD9-209ENST00000564255 FTCDO95954 541 aa2.63□□□□□ -1.99
CHD9-209ENST00000564255 MYBL1P10243 752 aa2.63□□□□□ -1.99
CHD9-209ENST00000564255 CTSAP10619 480 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms