RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 DPYSL2Q16555 572 aa23.96■■□□□ 1.43
NME3-206ENST00000564252 B3GNT8Q7Z7M8 397 aa23.96■■□□□ 1.43
NME3-206ENST00000564252 OR6C4Q8NGE1 309 aa23.96■■□□□ 1.43
NME3-206ENST00000564252 SPOCK2Q92563 424 aa23.96■■□□□ 1.43
NME3-206ENST00000564252 GFM1Q96RP9 751 aaKnown RBP23.96■■□□□ 1.43
NME3-206ENST00000564252 ISCUQ9H1K1 167 aa23.96■■□□□ 1.43
NME3-206ENST00000564252 MRPL40Q9NQ50 206 aaKnown RBP23.96■■□□□ 1.43
NME3-206ENST00000564252 ETNK2Q9NVF9 386 aa23.96■■□□□ 1.43
NME3-206ENST00000564252 MYO1AQ9UBC5 1043 aa23.96■■□□□ 1.43
NME3-206ENST00000564252 A0A1W2PQM1 296 aa23.95■■□□□ 1.42
NME3-206ENST00000564252 TTC24A2A3L6 582 aaPredicted RBP23.95■■□□□ 1.42
NME3-206ENST00000564252 A8MX80 341 aa23.95■■□□□ 1.42
NME3-206ENST00000564252 D6RAR5 112 aa23.95■■□□□ 1.42
NME3-206ENST00000564252 ERVH48-1M5A8F1 160 aa23.95■■□□□ 1.42
NME3-206ENST00000564252 TNFSF15O95150 251 aa23.95■■□□□ 1.42
NME3-206ENST00000564252 PEX11BO96011 259 aa23.95■■□□□ 1.42
NME3-206ENST00000564252 MYBL1P10243 752 aa23.95■■□□□ 1.42
NME3-206ENST00000564252 SKILP12757 684 aa23.95■■□□□ 1.42
NME3-206ENST00000564252 TCF4P15884 667 aa23.95■■□□□ 1.42
NME3-206ENST00000564252 OGFOD3Q6PK18 319 aa23.95■■□□□ 1.42
NME3-206ENST00000564252 PELI3Q8N2H9 469 aa23.95■■□□□ 1.42
NME3-206ENST00000564252 PAF1Q8N7H5 531 aa23.95■■□□□ 1.42
NME3-206ENST00000564252 SNRNP27Q8WVK2 155 aaKnown RBP23.95■■□□□ 1.42
NME3-206ENST00000564252 TRIM11Q96F44 468 aa23.95■■□□□ 1.42
NME3-206ENST00000564252 MRPL47Q9HD33 250 aaKnown RBP23.95■■□□□ 1.42
NME3-206ENST00000564252 B4GALT6Q9UBX8 382 aa23.95■■□□□ 1.42
NME3-206ENST00000564252 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.94■■□□□ 1.42
NME3-206ENST00000564252 H3BRJ5 948 aa23.94■■□□□ 1.42
NME3-206ENST00000564252 TNFRSF10CO14798 259 aa23.94■■□□□ 1.42
NME3-206ENST00000564252 HTRA2O43464 458 aaPredicted RBP23.94■■□□□ 1.42
NME3-206ENST00000564252 RPLP0P05388 317 aaKnown RBP23.94■■□□□ 1.42
NME3-206ENST00000564252 ITGA2BP08514 1039 aa23.94■■□□□ 1.42
NME3-206ENST00000564252 CR2P20023 1033 aa23.94■■□□□ 1.42
NME3-206ENST00000564252 KELP23276 732 aa23.94■■□□□ 1.42
NME3-206ENST00000564252 SMTNL2Q2TAL5 461 aa23.94■■□□□ 1.42
NME3-206ENST00000564252 POLNQ7Z5Q5 900 aa23.94■■□□□ 1.42
NME3-206ENST00000564252 CCDC97Q96F63 343 aaPredicted RBP23.94■■□□□ 1.42
NME3-206ENST00000564252 COQ10AQ96MF6 247 aa23.94■■□□□ 1.42
NME3-206ENST00000564252 LGR4Q9BXB1 951 aa23.94■■□□□ 1.42
NME3-206ENST00000564252 NOBOXO60393 691 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 SOCS5O75159 536 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 AMPD1P23109 780 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 ARL4AP40617 200 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 RHDQ02161 417 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 VAC14Q08AM6 782 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 ZNF235Q14590 738 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 ACOX1Q15067 660 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 PNCKQ6P2M8 343 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 TAF8Q7Z7C8 310 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 SFTPA2Q8IWL1 248 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 PGBD5Q8N414 524 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 ZNF843Q8N446 348 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 CSPG4P5Q96PW8 444 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.93■■□□□ 1.42
NME3-206ENST00000564252 FOXP3Q9BZS1 431 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 TMEM168Q9H0V1 697 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 LRRN3Q9H3W5 708 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 WDR26Q9H7D7 661 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 EPB41L5Q9HCM4 733 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 APPL1Q9UKG1 709 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 PCDHGC4Q9Y5F7 938 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 ZNF462Q96JM2 2506 aa23.93■■□□□ 1.42
NME3-206ENST00000564252 PLD2O14939 933 aa23.92■■□□□ 1.42
NME3-206ENST00000564252 MAFKO60675 156 aa23.92■■□□□ 1.42
NME3-206ENST00000564252 HSPA9P38646 679 aaKnown RBP23.92■■□□□ 1.42
NME3-206ENST00000564252 ZNF165P49910 485 aa23.92■■□□□ 1.42
NME3-206ENST00000564252 INHBCP55103 352 aa23.92■■□□□ 1.42
NME3-206ENST00000564252 EIF3IQ13347 325 aaKnown RBP23.92■■□□□ 1.42
NME3-206ENST00000564252 NR1I3Q14994 352 aa23.92■■□□□ 1.42
NME3-206ENST00000564252 CNGA3Q16281 694 aa23.92■■□□□ 1.42
NME3-206ENST00000564252 BOLA3Q53S33 107 aa23.92■■□□□ 1.42
NME3-206ENST00000564252 CERCAMQ5T4B2 595 aa23.92■■□□□ 1.42
NME3-206ENST00000564252 TMCO3Q6UWJ1 677 aa23.92■■□□□ 1.42
NME3-206ENST00000564252 FAM46DQ8NEK8 389 aa23.92■■□□□ 1.42
NME3-206ENST00000564252 HSPH1Q92598 858 aa23.92■■□□□ 1.42
NME3-206ENST00000564252 NUDCD1Q96RS6 583 aa23.92■■□□□ 1.42
NME3-206ENST00000564252 CYP4F12Q9HCS2 524 aa23.92■■□□□ 1.42
NME3-206ENST00000564252 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.92■■□□□ 1.42
NME3-206ENST00000564252 A0A1W2PQ67 120 aa23.91■■□□□ 1.42
NME3-206ENST00000564252 TMX2-CTNND1H3BSU7 103 aa23.91■■□□□ 1.42
NME3-206ENST00000564252 RARAP10276 462 aa23.91■■□□□ 1.42
NME3-206ENST00000564252 GLB1P16278 677 aa23.91■■□□□ 1.42
NME3-206ENST00000564252 CCKBRP32239 447 aa23.91■■□□□ 1.42
NME3-206ENST00000564252 UGT1A5P35504 534 aa23.91■■□□□ 1.42
NME3-206ENST00000564252 CLN3Q13286 438 aa23.91■■□□□ 1.42
NME3-206ENST00000564252 TAF1BQ53T94 588 aaPredicted RBP23.91■■□□□ 1.42
NME3-206ENST00000564252 FIGNQ5HY92 759 aa23.91■■□□□ 1.42
NME3-206ENST00000564252 TXNRD3NBQ6F5E7 133 aa23.91■■□□□ 1.42
NME3-206ENST00000564252 RAB11FIP2Q7L804 512 aa23.91■■□□□ 1.42
NME3-206ENST00000564252 CCNJLQ8IV13 435 aa23.91■■□□□ 1.42
NME3-206ENST00000564252 FBXO39Q8N4B4 442 aa23.91■■□□□ 1.42
NME3-206ENST00000564252 CCL4L1Q8NHW4 92 aa23.91■■□□□ 1.42
NME3-206ENST00000564252 PDCD6IPQ8WUM4 868 aaKnown RBP23.91■■□□□ 1.42
NME3-206ENST00000564252 NUS1Q96E22 293 aa23.91■■□□□ 1.42
NME3-206ENST00000564252 WBP1Q96G27 269 aa23.91■■□□□ 1.42
NME3-206ENST00000564252 MGME1Q9BQP7 344 aa23.91■■□□□ 1.42
NME3-206ENST00000564252 STRADBQ9C0K7 418 aa23.91■■□□□ 1.42
NME3-206ENST00000564252 NOD2Q9HC29 1040 aa23.91■■□□□ 1.42
NME3-206ENST00000564252 UNC13CQ8NB66 2214 aa23.9■■□□□ 1.42
NME3-206ENST00000564252 PRSS38A1L453 326 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms