RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 TARSP26639 723 aaKnown RBP12.85□□□□□ -0.35
CLK3-214ENST00000564096 SSTR1P30872 391 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 VIPR1P32241 457 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 ABL2P42684 1182 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 DGKEP52429 567 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 ZNF140P52738 457 aaPredicted RBP12.85□□□□□ -0.35
CLK3-214ENST00000564096 FAM193AP78312 1265 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 SATB1Q01826 763 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 SLC29A2Q14542 456 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 STAT4Q14765 748 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 UAP1Q16222 522 aaPredicted RBP12.85□□□□□ -0.35
CLK3-214ENST00000564096 POM121L1PQ3SYA9 428 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 ANKRD20A4Q4UJ75 823 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 TJAP1Q5JTD0 557 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 ZDHHC20Q5W0Z9 365 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 DPPA4Q7L190 304 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 TTC7BQ86TV6 843 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 RASSF3Q86WH2 238 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 ZSWIM9Q86XI8 627 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 IGDCC3Q8IVU1 814 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 GOLGA6L1Q8N7Z2 621 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 CALML6Q8TD86 181 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 CERS2Q96G23 380 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 FAM129BQ96TA1 746 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 FUT8Q9BYC5 575 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 OSBPL6Q9BZF3 934 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 MFSD1Q9H3U5 465 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 ZFYVE1Q9HBF4 777 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 PCDH12Q9NPG4 1184 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 CHRAC1Q9NRG0 131 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 RAD18Q9NS91 495 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 NSMCE4AQ9NXX6 385 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 ZFATQ9P243 1243 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 TXNDC16Q9P2K2 825 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 B4GALT6Q9UBX8 382 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 PLAAQ9Y263 795 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 SPO11Q9Y5K1 396 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 ARL5AQ9Y689 179 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 IKBKGQ9Y6K9 419 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 FAM169AQ9Y6X4 670 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 MYO18AQ92614 2054 aaKnown RBP12.85□□□□□ -0.35
CLK3-214ENST00000564096 SPTBN5Q9NRC6 3674 aaKnown RBP12.85□□□□□ -0.35
CLK3-214ENST00000564096 COL6A3P12111 3177 aa12.85□□□□□ -0.35
CLK3-214ENST00000564096 TCRBV21S2A2A0A5A6 115 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 NPIPB15A6NHN6 443 aaPredicted RBP12.84□□□□□ -0.35
CLK3-214ENST00000564096 FAM170BA6NMN3 283 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 STK25O00506 426 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 NEMP1O14524 444 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 SLC7A4O43246 635 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 LDB2O43679 373 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 RPP40O75818 363 aaKnown RBP12.84□□□□□ -0.35
CLK3-214ENST00000564096 ALDH1A2O94788 518 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 ELFN1P0C7U0 828 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 ACADMP11310 421 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 SLC8A1P32418 973 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 HNF1BP35680 557 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 HMGCLP35914 325 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 MMP12P39900 470 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 MAGEA9P43362 315 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 GPX6P59796 221 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 MGAT5Q09328 741 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 GPS2Q13227 327 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 THOC5Q13769 683 aaKnown RBP12.84□□□□□ -0.35
CLK3-214ENST00000564096 LRRC66Q68CR7 880 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 AFTPHQ6ULP2 937 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 CYS1Q717R9 158 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 TAOK1Q7L7X3 1001 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 LYSMD3Q7Z3D4 306 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 KBTBD6Q86V97 674 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 KCNMB4Q86W47 210 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 CACUL1Q86Y37 369 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 LMNTD2Q8IXW0 634 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 OTUD6BQ8N6M0 293 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 FBF1Q8TES7 1133 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 GANCQ8TET4 914 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.84□□□□□ -0.35
CLK3-214ENST00000564096 ARRDC3Q96B67 414 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 MFSD3Q96ES6 412 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 OMDQ99983 421 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 LMAN1LQ9HAT1 526 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 TREX1Q9NSU2 369 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 C20orf96Q9NUD7 363 aaPredicted RBP12.84□□□□□ -0.35
CLK3-214ENST00000564096 PKD2L2Q9NZM6 624 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 FETUBQ9UGM5 382 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 SARDHQ9UL12 918 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 EYSQ5T1H1 3165 aa12.84□□□□□ -0.35
CLK3-214ENST00000564096 C5orf42Q9H799 3197 aa12.83□□□□□ -0.36
CLK3-214ENST00000564096 ZCWPW2A0A1B0GU75 182 aa12.83□□□□□ -0.36
CLK3-214ENST00000564096 A0A1W2PQF6 199 aa12.83□□□□□ -0.36
CLK3-214ENST00000564096 CCDC78A2IDD5 438 aa12.83□□□□□ -0.36
CLK3-214ENST00000564096 H0Y858 1186 aa12.83□□□□□ -0.36
CLK3-214ENST00000564096 PSMD11O00231 422 aa12.83□□□□□ -0.36
CLK3-214ENST00000564096 PFDN6O15212 129 aa12.83□□□□□ -0.36
CLK3-214ENST00000564096 MID1O15344 667 aa12.83□□□□□ -0.36
CLK3-214ENST00000564096 NMBRP28336 390 aa12.83□□□□□ -0.36
CLK3-214ENST00000564096 SPAM1P38567 509 aa12.83□□□□□ -0.36
CLK3-214ENST00000564096 COPAP53621 1224 aa12.83□□□□□ -0.36
CLK3-214ENST00000564096 RPS14P62263 151 aaKnown RBP12.83□□□□□ -0.36
CLK3-214ENST00000564096 ZXDAP98168 799 aa12.83□□□□□ -0.36
CLK3-214ENST00000564096 ACVR1Q04771 509 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms