RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 PIH1D2Q8WWB5 315 aa30.82■■■□□ 2.52
CMTM4-204ENST00000563952 BAG1Q99933 345 aaPredicted RBP30.82■■■□□ 2.52
CMTM4-204ENST00000563952 TMEM121BQ9BXQ6 578 aaPredicted RBP30.82■■■□□ 2.52
CMTM4-204ENST00000563952 SLC13A1Q9BZW2 595 aa30.82■■■□□ 2.52
CMTM4-204ENST00000563952 SEPT10Q9P0V9 454 aa30.82■■■□□ 2.52
CMTM4-204ENST00000563952 REXO2Q9Y3B8 237 aaKnown RBP30.82■■■□□ 2.52
CMTM4-204ENST00000563952 K7ESM1 405 aa30.81■■■□□ 2.52
CMTM4-204ENST00000563952 PPP1R12AO14974 1030 aaPredicted RBP30.81■■■□□ 2.52
CMTM4-204ENST00000563952 HEXIM1O94992 359 aaKnown RBP30.81■■■□□ 2.52
CMTM4-204ENST00000563952 ALPIP09923 528 aa30.81■■■□□ 2.52
CMTM4-204ENST00000563952 MARCKSL1P49006 195 aa30.81■■■□□ 2.52
CMTM4-204ENST00000563952 PPARDQ03181 441 aa30.81■■■□□ 2.52
CMTM4-204ENST00000563952 ZBTB17Q13105 803 aa30.81■■■□□ 2.52
CMTM4-204ENST00000563952 NFATC4Q14934 902 aa30.81■■■□□ 2.52
CMTM4-204ENST00000563952 FAM182AQ5T1J6 154 aa30.81■■■□□ 2.52
CMTM4-204ENST00000563952 ENPP7Q6UWV6 458 aa30.81■■■□□ 2.52
CMTM4-204ENST00000563952 B4GALNT4Q76KP1 1039 aa30.81■■■□□ 2.52
CMTM4-204ENST00000563952 TMPRSS7Q7RTY8 843 aa30.81■■■□□ 2.52
CMTM4-204ENST00000563952 NDUFAF2Q8N183 169 aa30.81■■■□□ 2.52
CMTM4-204ENST00000563952 SCRN2Q96FV2 425 aa30.81■■■□□ 2.52
CMTM4-204ENST00000563952 COQ10AQ96MF6 247 aa30.81■■■□□ 2.52
CMTM4-204ENST00000563952 OLFM3Q96PB7 478 aa30.81■■■□□ 2.52
CMTM4-204ENST00000563952 CEP41Q9BYV8 373 aa30.81■■■□□ 2.52
CMTM4-204ENST00000563952 SPASTQ9UBP0 616 aa30.81■■■□□ 2.52
CMTM4-204ENST00000563952 CHKBQ9Y259 395 aa30.81■■■□□ 2.52
CMTM4-204ENST00000563952 FZD6O60353 706 aa30.8■■■□□ 2.52
CMTM4-204ENST00000563952 C1SP09871 688 aa30.8■■■□□ 2.52
CMTM4-204ENST00000563952 LHCGRP22888 699 aa30.8■■■□□ 2.52
CMTM4-204ENST00000563952 CDC25BP30305 580 aa30.8■■■□□ 2.52
CMTM4-204ENST00000563952 EPHB1P54762 984 aa30.8■■■□□ 2.52
CMTM4-204ENST00000563952 IFI35P80217 286 aaPredicted RBP30.8■■■□□ 2.52
CMTM4-204ENST00000563952 C1orf61Q13536 156 aa30.8■■■□□ 2.52
CMTM4-204ENST00000563952 ARHGEF7Q14155 803 aa30.8■■■□□ 2.52
CMTM4-204ENST00000563952 TFDP2Q14188 446 aa30.8■■■□□ 2.52
CMTM4-204ENST00000563952 PRRT3Q5FWE3 981 aa30.8■■■□□ 2.52
CMTM4-204ENST00000563952 TSPAN33Q86UF1 283 aa30.8■■■□□ 2.52
CMTM4-204ENST00000563952 MARCH9Q86YJ5 346 aa30.8■■■□□ 2.52
CMTM4-204ENST00000563952 CCDC50Q8IVM0 306 aa30.8■■■□□ 2.52
CMTM4-204ENST00000563952 KATNAL2Q8IYT4 538 aa30.8■■■□□ 2.52
CMTM4-204ENST00000563952 GALNT15Q8N3T1 639 aa30.8■■■□□ 2.52
CMTM4-204ENST00000563952 NUS1Q96E22 293 aa30.8■■■□□ 2.52
CMTM4-204ENST00000563952 SMIM14Q96QK8 99 aa30.8■■■□□ 2.52
CMTM4-204ENST00000563952 MCCC1Q96RQ3 725 aaPredicted RBP30.8■■■□□ 2.52
CMTM4-204ENST00000563952 IL12RB2Q99665 862 aa30.8■■■□□ 2.52
CMTM4-204ENST00000563952 SBDSQ9Y3A5 250 aaKnown RBP eCLIP30.8■■■□□ 2.52
CMTM4-204ENST00000563952 CSNK1G3Q9Y6M4 447 aa30.8■■■□□ 2.52
CMTM4-204ENST00000563952 DUSP10Q9Y6W6 482 aa30.8■■■□□ 2.52
CMTM4-204ENST00000563952 CST8O60676 142 aa30.79■■■□□ 2.52
CMTM4-204ENST00000563952 PROS1P07225 676 aa30.79■■■□□ 2.52
CMTM4-204ENST00000563952 MYF5P13349 255 aa30.79■■■□□ 2.52
CMTM4-204ENST00000563952 CA4P22748 312 aa30.79■■■□□ 2.52
CMTM4-204ENST00000563952 TAZQ16635 292 aa30.79■■■□□ 2.52
CMTM4-204ENST00000563952 ST3GAL2Q16842 350 aa30.79■■■□□ 2.52
CMTM4-204ENST00000563952 DEFB133Q30KQ1 61 aa30.79■■■□□ 2.52
CMTM4-204ENST00000563952 CCNI2Q6ZMN8 369 aaPredicted RBP30.79■■■□□ 2.52
CMTM4-204ENST00000563952 RD3Q7Z3Z2 195 aa30.79■■■□□ 2.52
CMTM4-204ENST00000563952 HSD11B1LQ7Z5J1 315 aa30.79■■■□□ 2.52
CMTM4-204ENST00000563952 HID1Q8IV36 788 aa30.79■■■□□ 2.52
CMTM4-204ENST00000563952 TSACCQ96A04 125 aaPredicted RBP30.79■■■□□ 2.52
CMTM4-204ENST00000563952 APOLD1Q96LR9 279 aa30.79■■■□□ 2.52
CMTM4-204ENST00000563952 LRRC61Q9BV99 259 aa30.79■■■□□ 2.52
CMTM4-204ENST00000563952 DUSP23Q9BVJ7 150 aa30.79■■■□□ 2.52
CMTM4-204ENST00000563952 TDRD1Q9BXT4 1180 aaKnown RBP30.79■■■□□ 2.52
CMTM4-204ENST00000563952 IMPACTQ9P2X3 320 aa30.79■■■□□ 2.52
CMTM4-204ENST00000563952 SAE1Q9UBE0 346 aaPredicted RBP30.79■■■□□ 2.52
CMTM4-204ENST00000563952 PLXNB3Q9ULL4 1909 aa30.79■■■□□ 2.52
CMTM4-204ENST00000563952 SPEGQ15772 3267 aa30.78■■■□□ 2.52
CMTM4-204ENST00000563952 A0A0U1RQS6 177 aa30.78■■■□□ 2.52
CMTM4-204ENST00000563952 FAM149AA5PLN7 773 aa30.78■■■□□ 2.52
CMTM4-204ENST00000563952 ZRANB2O95218 330 aaKnown RBP eCLIP30.78■■■□□ 2.52
CMTM4-204ENST00000563952 ACP1P24666 158 aa30.78■■■□□ 2.52
CMTM4-204ENST00000563952 HNF1BP35680 557 aa30.78■■■□□ 2.52
CMTM4-204ENST00000563952 ETV3P41162 512 aa30.78■■■□□ 2.52
CMTM4-204ENST00000563952 CD86P42081 329 aa30.78■■■□□ 2.52
CMTM4-204ENST00000563952 CLDN6P56747 220 aa30.78■■■□□ 2.52
CMTM4-204ENST00000563952 SMAD1Q15797 465 aaKnown RBP30.78■■■□□ 2.52
CMTM4-204ENST00000563952 ALG11Q2TAA5 492 aa30.78■■■□□ 2.52
CMTM4-204ENST00000563952 NYAP1Q6ZVC0 841 aa30.78■■■□□ 2.52
CMTM4-204ENST00000563952 KIAA1328Q86T90 577 aa30.78■■■□□ 2.52
CMTM4-204ENST00000563952 RCOR2Q8IZ40 523 aa30.78■■■□□ 2.52
CMTM4-204ENST00000563952 CNTD1Q8N815 330 aa30.78■■■□□ 2.52
CMTM4-204ENST00000563952 KRT35Q92764 455 aa30.78■■■□□ 2.52
CMTM4-204ENST00000563952 WDR92Q96MX6 357 aa30.78■■■□□ 2.52
CMTM4-204ENST00000563952 KLQ9UEF7 1012 aa30.78■■■□□ 2.52
CMTM4-204ENST00000563952 PPIL1Q9Y3C6 166 aa30.78■■■□□ 2.52
CMTM4-204ENST00000563952 AKAP13Q12802 2813 aa30.77■■■□□ 2.52
CMTM4-204ENST00000563952 CACNB4O00305 520 aaPredicted RBP30.77■■■□□ 2.52
CMTM4-204ENST00000563952 GCATO75600 419 aa30.77■■■□□ 2.52
CMTM4-204ENST00000563952 CDK4P11802 303 aa30.77■■■□□ 2.52
CMTM4-204ENST00000563952 TCEA2Q15560 299 aa30.77■■■□□ 2.52
CMTM4-204ENST00000563952 TFDP3Q5H9I0 405 aa30.77■■■□□ 2.52
CMTM4-204ENST00000563952 ESRP1Q6NXG1 681 aaKnown RBP30.77■■■□□ 2.52
CMTM4-204ENST00000563952 PNCKQ6P2M8 343 aa30.77■■■□□ 2.52
CMTM4-204ENST00000563952 PELI3Q8N2H9 469 aa30.77■■■□□ 2.52
CMTM4-204ENST00000563952 LPCAT1Q8NF37 534 aa30.77■■■□□ 2.52
CMTM4-204ENST00000563952 ATL2Q8NHH9 583 aa30.77■■■□□ 2.52
CMTM4-204ENST00000563952 FUBP1Q96AE4 644 aaKnown RBP30.77■■■□□ 2.52
CMTM4-204ENST00000563952 AGAP3Q96P47 875 aa30.77■■■□□ 2.52
CMTM4-204ENST00000563952 LACRTQ9GZZ8 138 aa30.77■■■□□ 2.52
CMTM4-204ENST00000563952 BRD8Q9H0E9 1235 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms