RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 KRT10P13645 584 aa20.97■□□□□ 0.95
HERC2-204ENST00000563945 PSMA2P25787 234 aa20.97■□□□□ 0.95
HERC2-204ENST00000563945 NFKBIAP25963 317 aa20.97■□□□□ 0.95
HERC2-204ENST00000563945 SCNN1BP51168 640 aa20.97■□□□□ 0.95
HERC2-204ENST00000563945 RENBPP51606 427 aa20.97■□□□□ 0.95
HERC2-204ENST00000563945 UBXN1Q04323 297 aa20.97■□□□□ 0.95
HERC2-204ENST00000563945 RFTN1Q14699 578 aaPredicted RBP20.97■□□□□ 0.95
HERC2-204ENST00000563945 MAP9Q49MG5 647 aa20.97■□□□□ 0.95
HERC2-204ENST00000563945 SPECC1LQ69YQ0 1117 aa20.97■□□□□ 0.95
HERC2-204ENST00000563945 PPP1R2P3Q6NXS1 205 aa20.97■□□□□ 0.95
HERC2-204ENST00000563945 NYAP1Q6ZVC0 841 aa20.97■□□□□ 0.95
HERC2-204ENST00000563945 SPRED1Q7Z699 444 aa20.97■□□□□ 0.95
HERC2-204ENST00000563945 PIM3Q86V86 326 aa20.97■□□□□ 0.95
HERC2-204ENST00000563945 ZSWIM9Q86XI8 627 aa20.97■□□□□ 0.95
HERC2-204ENST00000563945 USP7Q93009 1102 aa20.97■□□□□ 0.95
HERC2-204ENST00000563945 EIF3CQ99613 913 aaKnown RBP20.97■□□□□ 0.95
HERC2-204ENST00000563945 TMEM168Q9H0V1 697 aa20.97■□□□□ 0.95
HERC2-204ENST00000563945 FGF22Q9HCT0 170 aa20.97■□□□□ 0.95
HERC2-204ENST00000563945 MRPL40Q9NQ50 206 aaKnown RBP20.97■□□□□ 0.95
HERC2-204ENST00000563945 GPATCH2LQ9NWQ4 482 aa20.97■□□□□ 0.95
HERC2-204ENST00000563945 RHPN2P1A8MT19 583 aa20.96■□□□□ 0.95
HERC2-204ENST00000563945 A8MX80 341 aa20.96■□□□□ 0.95
HERC2-204ENST00000563945 NUDT21O43809 227 aaKnown RBP20.96■□□□□ 0.95
HERC2-204ENST00000563945 NOBOXO60393 691 aa20.96■□□□□ 0.95
HERC2-204ENST00000563945 RNF8O76064 485 aa20.96■□□□□ 0.95
HERC2-204ENST00000563945 ITGB2P05107 769 aa20.96■□□□□ 0.95
HERC2-204ENST00000563945 ITIH1P19827 911 aa20.96■□□□□ 0.95
HERC2-204ENST00000563945 TNFAIP3P21580 790 aa20.96■□□□□ 0.95
HERC2-204ENST00000563945 RGRP47804 291 aa20.96■□□□□ 0.95
HERC2-204ENST00000563945 ZFP36L1Q07352 338 aaKnown RBP20.96■□□□□ 0.95
HERC2-204ENST00000563945 NSUN2Q08J23 767 aaKnown RBP eCLIP20.96■□□□□ 0.95
HERC2-204ENST00000563945 ERMARDQ5T6L9 678 aa20.96■□□□□ 0.95
HERC2-204ENST00000563945 PNCKQ6P2M8 343 aa20.96■□□□□ 0.95
HERC2-204ENST00000563945 DPPA4Q7L190 304 aa20.96■□□□□ 0.95
HERC2-204ENST00000563945 MCOLN2Q8IZK6 566 aa20.96■□□□□ 0.95
HERC2-204ENST00000563945 EXD3Q8N9H8 876 aa20.96■□□□□ 0.95
HERC2-204ENST00000563945 EXTL1Q92935 676 aa20.96■□□□□ 0.95
HERC2-204ENST00000563945 SUDS3Q9H7L9 328 aaPredicted RBP20.96■□□□□ 0.95
HERC2-204ENST00000563945 KCTD5Q9NXV2 234 aa20.96■□□□□ 0.95
HERC2-204ENST00000563945 LRRK1Q38SD2 2015 aa20.95■□□□□ 0.94
HERC2-204ENST00000563945 PRAMEF33A0A0G2JMD5 474 aa20.95■□□□□ 0.94
HERC2-204ENST00000563945 TCRBV5S1A1TA0A578 114 aa20.95■□□□□ 0.94
HERC2-204ENST00000563945 PRAMEF10O60809 474 aa20.95■□□□□ 0.94
HERC2-204ENST00000563945 FERP16591 822 aa20.95■□□□□ 0.94
HERC2-204ENST00000563945 TRIM23P36406 574 aa20.95■□□□□ 0.94
HERC2-204ENST00000563945 IL10RBQ08334 325 aa20.95■□□□□ 0.94
HERC2-204ENST00000563945 AMZ1Q400G9 498 aa20.95■□□□□ 0.94
HERC2-204ENST00000563945 AFMIDQ63HM1 303 aa20.95■□□□□ 0.94
HERC2-204ENST00000563945 ZFAND4Q86XD8 727 aa20.95■□□□□ 0.94
HERC2-204ENST00000563945 GSDMCQ9BYG8 508 aa20.95■□□□□ 0.94
HERC2-204ENST00000563945 CARS2Q9HA77 564 aaKnown RBP20.95■□□□□ 0.94
HERC2-204ENST00000563945 PHPT1Q9NRX4 125 aaPredicted RBP20.95■□□□□ 0.94
HERC2-204ENST00000563945 PARVAQ9NVD7 372 aa20.95■□□□□ 0.94
HERC2-204ENST00000563945 PCSK1NQ9UHG2 260 aa20.95■□□□□ 0.94
HERC2-204ENST00000563945 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.94■□□□□ 0.94
HERC2-204ENST00000563945 A0A1W2PQC6 194 aa20.94■□□□□ 0.94
HERC2-204ENST00000563945 PRSS38A1L453 326 aa20.94■□□□□ 0.94
HERC2-204ENST00000563945 CPNE6O95741 557 aa20.94■□□□□ 0.94
HERC2-204ENST00000563945 CD82P27701 267 aa20.94■□□□□ 0.94
HERC2-204ENST00000563945 ALDH4A1P30038 563 aa20.94■□□□□ 0.94
HERC2-204ENST00000563945 AP1S1P61966 158 aa20.94■□□□□ 0.94
HERC2-204ENST00000563945 ILF3Q12906 894 aaKnown RBP eCLIP20.94■□□□□ 0.94
HERC2-204ENST00000563945 RALGDSQ12967 914 aa20.94■□□□□ 0.94
HERC2-204ENST00000563945 PEX6Q13608 980 aa20.94■□□□□ 0.94
HERC2-204ENST00000563945 HLTFQ14527 1009 aaKnown RBP eCLIP20.94■□□□□ 0.94
HERC2-204ENST00000563945 PPP6R3Q5H9R7 873 aaPredicted RBP20.94■□□□□ 0.94
HERC2-204ENST00000563945 PPP1R15BQ5SWA1 713 aa20.94■□□□□ 0.94
HERC2-204ENST00000563945 KCTD16Q68DU8 428 aa20.94■□□□□ 0.94
HERC2-204ENST00000563945 RFX8Q6ZV50 586 aa20.94■□□□□ 0.94
HERC2-204ENST00000563945 ECHDC3Q96DC8 303 aa20.94■□□□□ 0.94
HERC2-204ENST00000563945 SEPT3Q9UH03 358 aa20.94■□□□□ 0.94
HERC2-204ENST00000563945 MYO18BQ8IUG5 2567 aa20.93■□□□□ 0.94
HERC2-204ENST00000563945 A0A1W2PQ67 120 aa20.93■□□□□ 0.94
HERC2-204ENST00000563945 LGALS16A8MUM7 142 aa20.93■□□□□ 0.94
HERC2-204ENST00000563945 TMCO5BA8MYB1 307 aa20.93■□□□□ 0.94
HERC2-204ENST00000563945 PRPSAP2O60256 369 aa20.93■□□□□ 0.94
HERC2-204ENST00000563945 CCNB1P14635 433 aa20.93■□□□□ 0.94
HERC2-204ENST00000563945 ERCC2P18074 760 aa20.93■□□□□ 0.94
HERC2-204ENST00000563945 LINC00303Q3SY05 128 aa20.93■□□□□ 0.94
HERC2-204ENST00000563945 DENND2CQ68D51 928 aa20.93■□□□□ 0.94
HERC2-204ENST00000563945 VASH2Q86V25 355 aa20.93■□□□□ 0.94
HERC2-204ENST00000563945 CCL4L1Q8NHW4 92 aa20.93■□□□□ 0.94
HERC2-204ENST00000563945 ZDHHC1Q8WTX9 485 aa20.93■□□□□ 0.94
HERC2-204ENST00000563945 PDCD6IPQ8WUM4 868 aaKnown RBP20.93■□□□□ 0.94
HERC2-204ENST00000563945 NUS1Q96E22 293 aa20.93■□□□□ 0.94
HERC2-204ENST00000563945 LGR4Q9BXB1 951 aa20.93■□□□□ 0.94
HERC2-204ENST00000563945 SEMA6CQ9H3T2 930 aa20.93■□□□□ 0.94
HERC2-204ENST00000563945 LIMA1Q9UHB6 759 aaKnown RBP20.93■□□□□ 0.94
HERC2-204ENST00000563945 GOLGA6CA6NDK9 693 aa20.92■□□□□ 0.94
HERC2-204ENST00000563945 GOLGA6BA6NDN3 693 aa20.92■□□□□ 0.94
HERC2-204ENST00000563945 GOLGA6DP0CG33 693 aa20.92■□□□□ 0.94
HERC2-204ENST00000563945 MYCLP1P12525 358 aaPredicted RBP20.92■□□□□ 0.94
HERC2-204ENST00000563945 ETV5P41161 510 aa20.92■□□□□ 0.94
HERC2-204ENST00000563945 CSRP3P50461 194 aa20.92■□□□□ 0.94
HERC2-204ENST00000563945 OGDHQ02218 1023 aa20.92■□□□□ 0.94
HERC2-204ENST00000563945 SRSF6Q13247 344 aaKnown RBP20.92■□□□□ 0.94
HERC2-204ENST00000563945 ZNF235Q14590 738 aa20.92■□□□□ 0.94
HERC2-204ENST00000563945 LBRQ14739 615 aaKnown RBP20.92■□□□□ 0.94
HERC2-204ENST00000563945 CA9Q16790 459 aa20.92■□□□□ 0.94
HERC2-204ENST00000563945 SASS6Q6UVJ0 657 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms