RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 DKK1O94907 266 aa28.37■■■□□ 2.13
NME3-203ENST00000563367 HEXIM1O94992 359 aaKnown RBP28.37■■■□□ 2.13
NME3-203ENST00000563367 PRLP01236 227 aa28.37■■■□□ 2.13
NME3-203ENST00000563367 PCCBP05166 539 aa28.37■■■□□ 2.13
NME3-203ENST00000563367 ALPIP09923 528 aa28.37■■■□□ 2.13
NME3-203ENST00000563367 GIMD1P0DJR0 217 aa28.37■■■□□ 2.13
NME3-203ENST00000563367 NR2C2P49116 596 aa28.37■■■□□ 2.13
NME3-203ENST00000563367 ACOX1Q15067 660 aa28.37■■■□□ 2.13
NME3-203ENST00000563367 TSPAN33Q86UF1 283 aa28.37■■■□□ 2.13
NME3-203ENST00000563367 CBARPQ8N350 705 aaPredicted RBP28.37■■■□□ 2.13
NME3-203ENST00000563367 RBM41Q96IZ5 413 aaKnown RBP28.37■■■□□ 2.13
NME3-203ENST00000563367 TDRD1Q9BXT4 1180 aaKnown RBP28.37■■■□□ 2.13
NME3-203ENST00000563367 CHD8Q9HCK8 2581 aa28.36■■■□□ 2.13
NME3-203ENST00000563367 TOR1BO14657 336 aa28.36■■■□□ 2.13
NME3-203ENST00000563367 ENC1O14682 589 aa28.36■■■□□ 2.13
NME3-203ENST00000563367 TRIM16O95361 564 aa28.36■■■□□ 2.13
NME3-203ENST00000563367 TGM2P21980 687 aa28.36■■■□□ 2.13
NME3-203ENST00000563367 PTK2BQ14289 1009 aa28.36■■■□□ 2.13
NME3-203ENST00000563367 PRKD1Q15139 912 aaPredicted RBP28.36■■■□□ 2.13
NME3-203ENST00000563367 HSD11B1LQ7Z5J1 315 aa28.36■■■□□ 2.13
NME3-203ENST00000563367 APOOQ9BUR5 198 aa28.36■■■□□ 2.13
NME3-203ENST00000563367 BRD8Q9H0E9 1235 aa28.36■■■□□ 2.13
NME3-203ENST00000563367 TCEAL2Q9H3H9 227 aaPredicted RBP28.36■■■□□ 2.13
NME3-203ENST00000563367 SEPT10Q9P0V9 454 aa28.36■■■□□ 2.13
NME3-203ENST00000563367 OR1A2Q9Y585 309 aa28.36■■■□□ 2.13
NME3-203ENST00000563367 GOLGA6L6A8MZA4 724 aa28.35■■■□□ 2.13
NME3-203ENST00000563367 FFAR2O15552 330 aa28.35■■■□□ 2.13
NME3-203ENST00000563367 CYP2A6P11509 494 aaPredicted RBP28.35■■■□□ 2.13
NME3-203ENST00000563367 JUNDP17535 347 aa28.35■■■□□ 2.13
NME3-203ENST00000563367 HNF1BP35680 557 aa28.35■■■□□ 2.13
NME3-203ENST00000563367 CD86P42081 329 aa28.35■■■□□ 2.13
NME3-203ENST00000563367 HNRNPKP61978 463 aaKnown RBP eCLIP28.35■■■□□ 2.13
NME3-203ENST00000563367 SKOR1P84550 965 aa28.35■■■□□ 2.13
NME3-203ENST00000563367 DNAJC3Q13217 504 aa28.35■■■□□ 2.13
NME3-203ENST00000563367 PPP2R5EQ16537 467 aa28.35■■■□□ 2.13
NME3-203ENST00000563367 DENND2CQ68D51 928 aa28.35■■■□□ 2.13
NME3-203ENST00000563367 MACC1Q6ZN28 852 aa28.35■■■□□ 2.13
NME3-203ENST00000563367 NYAP1Q6ZVC0 841 aa28.35■■■□□ 2.13
NME3-203ENST00000563367 USP45Q70EL2 814 aa28.35■■■□□ 2.13
NME3-203ENST00000563367 PELI3Q8N2H9 469 aa28.35■■■□□ 2.13
NME3-203ENST00000563367 AGAP3Q96P47 875 aa28.35■■■□□ 2.13
NME3-203ENST00000563367 HERPUD2Q9BSE4 406 aa28.35■■■□□ 2.13
NME3-203ENST00000563367 HEMGNQ9BXL5 484 aa28.35■■■□□ 2.13
NME3-203ENST00000563367 KLK13Q9UKR3 277 aa28.35■■■□□ 2.13
NME3-203ENST00000563367 AKAP13Q12802 2813 aa28.34■■■□□ 2.13
NME3-203ENST00000563367 CEP295Q9C0D2 2601 aa28.34■■■□□ 2.13
NME3-203ENST00000563367 MACROD2A1Z1Q3 448 aa28.34■■■□□ 2.13
NME3-203ENST00000563367 SIGLEC6O43699 453 aa28.34■■■□□ 2.13
NME3-203ENST00000563367 NFKBIAP25963 317 aa28.34■■■□□ 2.13
NME3-203ENST00000563367 CTNNA2P26232 953 aa28.34■■■□□ 2.13
NME3-203ENST00000563367 PEX5P50542 639 aa28.34■■■□□ 2.13
NME3-203ENST00000563367 KIF5AQ12840 1032 aa28.34■■■□□ 2.13
NME3-203ENST00000563367 MTM1Q13496 603 aa28.34■■■□□ 2.13
NME3-203ENST00000563367 CCDC157Q569K6 752 aa28.34■■■□□ 2.13
NME3-203ENST00000563367 NT5DC3Q86UY8 548 aa28.34■■■□□ 2.13
NME3-203ENST00000563367 RBFAQ8N0V3 343 aa28.34■■■□□ 2.13
NME3-203ENST00000563367 ZNF548Q8NEK5 533 aaPredicted RBP28.34■■■□□ 2.13
NME3-203ENST00000563367 P3H4Q92791 437 aa28.34■■■□□ 2.13
NME3-203ENST00000563367 HAUS1Q96CS2 278 aa28.34■■■□□ 2.13
NME3-203ENST00000563367 CNTNAP3BQ96NU0 1288 aa28.34■■■□□ 2.13
NME3-203ENST00000563367 CNTNAP3Q9BZ76 1288 aa28.34■■■□□ 2.13
NME3-203ENST00000563367 ACACBO00763 2458 aa28.33■■■□□ 2.13
NME3-203ENST00000563367 A0A0J9YYE9 177 aa28.33■■■□□ 2.13
NME3-203ENST00000563367 TRBC1P01850 177 aa28.33■■■□□ 2.13
NME3-203ENST00000563367 GSDMDP57764 484 aa28.33■■■□□ 2.13
NME3-203ENST00000563367 ZNF211Q13398 564 aaPredicted RBP28.33■■■□□ 2.13
NME3-203ENST00000563367 NFATC4Q14934 902 aa28.33■■■□□ 2.13
NME3-203ENST00000563367 BBS12Q6ZW61 710 aa28.33■■■□□ 2.13
NME3-203ENST00000563367 BZW1Q7L1Q6 419 aaKnown RBP28.33■■■□□ 2.13
NME3-203ENST00000563367 OR4C6Q8NH72 309 aa28.33■■■□□ 2.13
NME3-203ENST00000563367 TFB1MQ8WVM0 346 aaKnown RBP28.33■■■□□ 2.13
NME3-203ENST00000563367 ALG3Q92685 438 aa28.33■■■□□ 2.13
NME3-203ENST00000563367 PCDH9Q9HC56 1237 aa28.33■■■□□ 2.13
NME3-203ENST00000563367 CCDC66A2RUB6 948 aa28.32■■■□□ 2.12
NME3-203ENST00000563367 H3BM21 787 aa28.32■■■□□ 2.12
NME3-203ENST00000563367 K7ESM1 405 aa28.32■■■□□ 2.12
NME3-203ENST00000563367 SCAMP1O15126 338 aa28.32■■■□□ 2.12
NME3-203ENST00000563367 PTPN3P26045 913 aa28.32■■■□□ 2.12
NME3-203ENST00000563367 ETV3P41162 512 aa28.32■■■□□ 2.12
NME3-203ENST00000563367 EPHB1P54762 984 aa28.32■■■□□ 2.12
NME3-203ENST00000563367 PROX2Q3B8N5 592 aa28.32■■■□□ 2.12
NME3-203ENST00000563367 TEX44Q53QW1 395 aa28.32■■■□□ 2.12
NME3-203ENST00000563367 CRTC1Q6UUV9 634 aa28.32■■■□□ 2.12
NME3-203ENST00000563367 ZC3H18Q86VM9 953 aaKnown RBP28.32■■■□□ 2.12
NME3-203ENST00000563367 PHACTR4Q8IZ21 702 aa28.32■■■□□ 2.12
NME3-203ENST00000563367 NDUFAF2Q8N183 169 aa28.32■■■□□ 2.12
NME3-203ENST00000563367 NUS1Q96E22 293 aa28.32■■■□□ 2.12
NME3-203ENST00000563367 IMP4Q96G21 291 aaKnown RBP28.32■■■□□ 2.12
NME3-203ENST00000563367 RBM15Q96T37 977 aaKnown RBP eCLIP28.32■■■□□ 2.12
NME3-203ENST00000563367 FRYQ5TBA9 3013 aa28.31■■■□□ 2.12
NME3-203ENST00000563367 PSMD11O00231 422 aa28.31■■■□□ 2.12
NME3-203ENST00000563367 COPS2P61201 443 aa28.31■■■□□ 2.12
NME3-203ENST00000563367 ARHGEF7Q14155 803 aa28.31■■■□□ 2.12
NME3-203ENST00000563367 LRRC66Q68CR7 880 aa28.31■■■□□ 2.12
NME3-203ENST00000563367 KCTD16Q68DU8 428 aa28.31■■■□□ 2.12
NME3-203ENST00000563367 ESRP1Q6NXG1 681 aaKnown RBP28.31■■■□□ 2.12
NME3-203ENST00000563367 AADACL2Q6P093 401 aa28.31■■■□□ 2.12
NME3-203ENST00000563367 PNCKQ6P2M8 343 aa28.31■■■□□ 2.12
NME3-203ENST00000563367 ENPP7Q6UWV6 458 aa28.31■■■□□ 2.12
NME3-203ENST00000563367 RFLNAQ6ZTI6 216 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms